RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 PCDHA6Q9UN73 950 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 TRIM33Q9UPN9 1127 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 PCDHA8Q9Y5H6 950 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 SRCAPQ6ZRS2 3230 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 LMTK3Q96Q04 1460 aa11.33□□□□□ -0.59
PRPF38B-201ENST00000370021 TCP11X1B4DZS4 312 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 IGF2BP3O00425 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 ATP6V1G2O95670 118 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 PLCG2P16885 1265 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 CCNHP51946 323 aaPredicted RBP11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 ZNF131P52739 623 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 KCNJ2P63252 427 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 DR1Q01658 176 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 CALCOCO2Q13137 446 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.61e-6■■■■□ 25.6
PRPF38B-201ENST00000370021 SLC29A2Q14542 456 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 MESDQ14696 234 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 LRRC47Q8N1G4 583 aaKnown RBP11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 ANKS1AQ92625 1134 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 CAVIN3Q969G5 261 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 NEUROG2Q9H2A3 272 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 NOP53Q9NZM5 478 aaKnown RBP11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 ARMCX3Q9UH62 379 aaPredicted RBP11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 MCM8Q9UJA3 840 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 ATP6V0A2Q9Y487 856 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 CNTNAP5Q8WYK1 1306 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 RASSF10A6NK89 507 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 A8MUI8 341 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 SHBGP04278 402 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 TNFAIP3P21580 790 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 KCNJ1P48048 391 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 GNAQP50148 359 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 KCNH2Q12809 1159 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 TNIP1Q15025 636 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 EXOC3L4Q17RC7 722 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 ZCWPW1Q9H0M4 648 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 CHMP2AO43633 222 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 SPOPO43791 374 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 DDAH1O94760 285 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 UBOX5O94941 541 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 LONRF1Q17RB8 773 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 CCDC65Q8IXS2 484 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 SPICE1Q8N0Z3 855 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 TAOK3Q9H2K8 898 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 ABCF3Q9NUQ8 709 aa11.33□□□□□ -0.6
PRPF38B-201ENST00000370021 RGPD5Q99666 1765 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 TRPM3Q9HCF6 1732 aaPredicted RBP11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 PCDH11XQ9BZA7 1347 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 PCDH11YQ9BZA8 1340 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 CCDC169A6NNP5 214 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 KLRC4O43908 158 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 SLC16A2P36021 539 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 SEPT14Q6ZU15 432 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 GLYCTKQ8IVS8 523 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 NEK9Q8TD19 979 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 EPS8L3Q8TE67 593 aaKnown RBP11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 ERGIC2Q96RQ1 377 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 ETNK1Q9HBU6 452 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 RASAL2Q9UJF2 1139 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 WDR91A4D1P6 747 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 GRID2IPA4D2P6 1211 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 RASGRF2O14827 1237 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 TRAPPC3O43617 180 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 XRCC5P13010 732 aaKnown RBP11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 ELF3P78545 371 aaPredicted RBP11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 BIRC3Q13489 604 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 THEMIS2Q5TEJ8 643 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 ZNF746Q6NUN9 644 aaPredicted RBP11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 PIGBQ92521 554 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 FBXO3Q9UK99 471 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 PCDHA12Q9UN75 941 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 KDM6AO15550 1401 aaPredicted RBP11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 AP1G2O75843 785 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 GCNT3O95395 438 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 CSF1RP07333 972 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 SLC18A3Q16572 532 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 ARMC3Q5W041 872 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 TMED8Q6PL24 325 aaPredicted RBP11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 TRPM8Q7Z2W7 1104 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 KRT25Q7Z3Z0 450 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 SYCP3Q8IZU3 236 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 RNF10Q8N5U6 811 aaKnown RBP11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 AGAP11Q8TF27 550 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 IFT74Q96LB3 600 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 NUDT12Q9BQG2 462 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 RAB17Q9H0T7 212 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 ISCUQ9H1K1 167 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 RNF14Q9UBS8 474 aa11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 ZNF142P52746 1687 aaPredicted RBP11.32□□□□□ -0.6
PRPF38B-201ENST00000370021 MYH15Q9Y2K3 1946 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 CYP2J2P51589 502 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 MECOMQ03112 1051 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 CUL1Q13616 776 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 NAB2Q15742 525 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 CYP4F22Q6NT55 531 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 AADACL2Q6P093 401 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 CLEC10AQ8IUN9 316 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 GPR101Q96P66 508 aaPredicted RBP11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 OSGEPQ9NPF4 335 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms