RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 PIGWQ7Z7B1 504 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 MOV10L1Q9BXT6 1211 aaKnown RBP11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 NEUROG2Q9H2A3 272 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 CCDC134Q9H6E4 229 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 STK32BQ9NY57 414 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 AIPL1Q9NZN9 384 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 PHF20L1A8MW92 1017 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 PPFIA2O75334 1257 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 NOL4O94818 638 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 GNAQP50148 359 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 PSMD2Q13200 908 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 ITPK1Q13572 414 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 PPP1R7Q15435 360 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 HLFQ16534 295 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 INF2Q27J81 1249 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 KIAA0753Q2KHM9 967 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 RASGEF1CQ8N431 466 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 CALML4Q96GE6 196 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 TXLNGYQ9BZA5 131 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 BAIAP2L1Q9UHR4 511 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 ZNF330Q9Y3S2 320 aaPredicted RBP11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 MAST2Q6P0Q8 1798 aa11.5□□□□□ -0.57
LYSMD1-201ENST00000368908 SMIM22K7EJ46 135 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 KCNK3O14649 394 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 SART1O43290 800 aaKnown RBP11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 STARD3NLO95772 234 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 ZNF268Q14587 947 aaPredicted RBP11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 SV2BQ7L1I2 683 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 CCDC26Q8TAB7 109 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 RASGRP4Q8TDF6 673 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 L3MBTL3Q96JM7 780 aaPredicted RBP11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 SLC39A2Q9NP94 309 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 ZNF804BA4D1E1 1349 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 ANXA13P27216 316 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 BCAMP50895 628 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 ACCSLQ4AC99 568 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 CDCA2Q69YH5 1023 aaPredicted RBP11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 KRT25Q7Z3Z0 450 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 CROCCP2Q86T23 111 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 LRRC57Q8N9N7 239 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 LINC00116Q8NCU8 138 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 ARMC2Q8NEN0 867 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 NSMCE1Q8WV22 266 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 TBC1D5Q92609 795 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 STAMBPL1Q96FJ0 436 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 KCNMB3Q9NPA1 279 aa11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 NOP53Q9NZM5 478 aaKnown RBP11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 PACSIN2Q9UNF0 486 aaPredicted RBP11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 NOC2LQ9Y3T9 749 aaKnown RBP11.49□□□□□ -0.57
LYSMD1-201ENST00000368908 A0A087X0T9 212 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 PPP1R12BO60237 982 aaPredicted RBP11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 CEP104O60308 925 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 NUDT17P0C025 328 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 FAM228BP0C875 321 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 DNA2P51530 1060 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 MARSP56192 900 aaKnown RBP11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 GRM4Q14833 912 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 ASIC2Q16515 512 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 DNAJC10Q8IXB1 793 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 GPKOWQ92917 476 aaPredicted RBP eCLIP11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 PGM2Q96G03 612 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 CEP63Q96MT8 703 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 MMTAG2Q9BU76 263 aaKnown RBP11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 LSM14BQ9BX40 385 aaKnown RBP11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 LRRC27Q9C0I9 530 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 NLRC4Q9NPP4 1024 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 HOMER3Q9NSC5 361 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 TRPC6Q9Y210 931 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 COL4A3BPQ9Y5P4 624 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 CYP2D7A0A087X1C5 515 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 ERVV-1B6SEH8 477 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 STXBP3O00186 592 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 CTNND1O60716 968 aaKnown RBP11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 ZPR1O75312 459 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 GNA14O95837 355 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 MMP13P45452 471 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 MYO1EQ12965 1108 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 SLC15A2Q16348 729 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 ZCWPW2Q504Y3 356 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 NAIF1Q69YI7 327 aaPredicted RBP11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 DDX42Q86XP3 938 aaKnown RBP eCLIP11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 ATXN2LQ8WWM7 1075 aaKnown RBP11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 ANKRD27Q96NW4 1050 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 SPAG5Q96R06 1193 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 NSRP1Q9H0G5 558 aaKnown RBP11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 SLC24A3Q9HC58 644 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 BARHL2Q9NY43 387 aa11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 TTC7AQ9ULT0 858 aaPredicted RBP11.48□□□□□ -0.57
LYSMD1-201ENST00000368908 DCDC2CA8MYV0 355 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 DAPK3O43293 454 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 ATP2C2O75185 946 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 RPSAP08865 295 aaKnown RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 IBSPP21815 317 aaPredicted RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 FLT3P36888 993 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 KLHL30Q0D2K2 578 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 PPP2R5EQ16537 467 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 BZW1Q7L1Q6 419 aaKnown RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 FLAD1Q8NFF5 587 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms