RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 EEPD1Q7L9B9 569 aa11.79□□□□□ -0.52
TPM3-212ENST00000368533 RMDN3Q96TC7 470 aa11.79□□□□□ -0.52
TPM3-212ENST00000368533 ZNF577Q9BSK1 485 aa11.79□□□□□ -0.52
TPM3-212ENST00000368533 PDE11AQ9HCR9 933 aa11.79□□□□□ -0.52
TPM3-212ENST00000368533 GAS7O60861 476 aa11.79□□□□□ -0.52
TPM3-212ENST00000368533 FOSP01100 380 aaPredicted RBP11.79□□□□□ -0.52
TPM3-212ENST00000368533 GCFC2P16383 781 aaKnown RBP11.79□□□□□ -0.52
TPM3-212ENST00000368533 PPP2R3AQ06190 1150 aa11.79□□□□□ -0.52
TPM3-212ENST00000368533 NELFCDQ8IXH7 590 aa11.79□□□□□ -0.52
TPM3-212ENST00000368533 SYTL5Q8TDW5 730 aaPredicted RBP11.79□□□□□ -0.52
TPM3-212ENST00000368533 CRYGNQ8WXF5 182 aa11.79□□□□□ -0.52
TPM3-212ENST00000368533 CTAGE1Q96RT6 745 aa11.79□□□□□ -0.52
TPM3-212ENST00000368533 SRRTQ9BXP5 876 aaKnown RBP11.79□□□□□ -0.52
TPM3-212ENST00000368533 DICER1Q9UPY3 1922 aaKnown RBP11.78□□□□□ -0.52
TPM3-212ENST00000368533 IGLV3-22A0A075B6J6 115 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 A0A1B0GTH6 734 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 CLGNO14967 610 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 FSTL1Q12841 308 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 CEP55Q53EZ4 464 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 RAD54LQ92698 747 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 DYDC2Q96IM9 177 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 FUT8Q9BYC5 575 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 PARD6BQ9BYG5 372 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 GLT8D2Q9H1C3 349 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 TAF1DQ9H5J8 278 aaPredicted RBP11.78□□□□□ -0.52
TPM3-212ENST00000368533 MRPL44Q9H9J2 332 aaKnown RBP11.78□□□□□ -0.52
TPM3-212ENST00000368533 GLTPD2A6NH11 291 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 KIF5CO60282 957 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 MAGEA9P43362 315 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 COG2Q14746 738 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 GPBP1Q86WP2 473 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 BHMT2Q9H2M3 363 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 ARFGAP3Q9NP61 516 aa11.78□□□□□ -0.52
TPM3-212ENST00000368533 PUF60Q9UHX1 559 aaKnown RBP11.78□□□□□ -0.52
TPM3-212ENST00000368533 SPDYE16A6NNV3 312 aaPredicted RBP11.77□□□□□ -0.52
TPM3-212ENST00000368533 RSPH10B2B2RC85 870 aa11.77□□□□□ -0.52
TPM3-212ENST00000368533 RSPH10BP0C881 870 aa11.77□□□□□ -0.52
TPM3-212ENST00000368533 MRPS9P82933 396 aaKnown RBP11.77□□□□□ -0.52
TPM3-212ENST00000368533 SPIRE1Q08AE8 756 aa11.77□□□□□ -0.52
TPM3-212ENST00000368533 PAK1Q13153 545 aa11.77□□□□□ -0.52
TPM3-212ENST00000368533 ZNF569Q5MCW4 686 aa11.77□□□□□ -0.52
TPM3-212ENST00000368533 ZNF658Q5TYW1 1059 aaPredicted RBP11.77□□□□□ -0.52
TPM3-212ENST00000368533 ARHGEF16Q5VV41 709 aa11.77□□□□□ -0.52
TPM3-212ENST00000368533 RRAGCQ9HB90 399 aa11.77□□□□□ -0.52
TPM3-212ENST00000368533 A0A0U1RQJ8 604 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 ATP9AO75110 1047 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 PLA2G4BP0C869 781 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 CNTN2Q02246 1040 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 RAD9BQ6WBX8 426 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 NCAPG2Q86XI2 1143 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 ATRIPQ8WXE1 791 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 OPTNQ96CV9 577 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 TRIM47Q96LD4 638 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 EIF2AK1Q9BQI3 630 aaKnown RBP11.77□□□□□ -0.53
TPM3-212ENST00000368533 IKZF4Q9H2S9 585 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 RABEP2Q9H5N1 569 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 CXorf56Q9H5V9 222 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 KCNH7Q9NS40 1196 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 WRAP73Q9P2S5 460 aaPredicted RBP11.77□□□□□ -0.53
TPM3-212ENST00000368533 ADD3Q9UEY8 706 aaKnown RBP11.77□□□□□ -0.53
TPM3-212ENST00000368533 PIK3CDO00329 1044 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 IPO5O00410 1097 aaKnown RBP11.77□□□□□ -0.53
TPM3-212ENST00000368533 IREB2P48200 963 aaKnown RBP11.77□□□□□ -0.53
TPM3-212ENST00000368533 KRT31Q15323 416 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 KIAA0895Q8NCT3 520 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 UNC45AQ9H3U1 944 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 ZNF214Q9UL59 606 aaPredicted RBP11.77□□□□□ -0.53
TPM3-212ENST00000368533 FAN1Q9Y2M0 1017 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 DOCK1Q14185 1865 aa11.77□□□□□ -0.53
TPM3-212ENST00000368533 EFCAB8A8MWE9 144 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 CCDC172P0C7W6 258 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 SPATA31C1P0DKV0 1188 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 DSG3P32926 999 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 NF2P35240 595 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 UBXN1Q04323 297 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 PDIA5Q14554 519 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 CATSPERGQ6ZRH7 1159 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 SLFN12Q8IYM2 578 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 EXOC4Q96A65 974 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 BTBD7Q9P203 1132 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 VAV3Q9UKW4 847 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 SYNPO2Q9UMS6 1093 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 CEP83Q9Y592 693 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 COL11A1P12107 1806 aaPredicted RBP11.76□□□□□ -0.53
TPM3-212ENST00000368533 CYP2C8P10632 490 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 FXR1P51114 621 aaKnown RBP eCLIP11.76□□□□□ -0.53
TPM3-212ENST00000368533 LONRF2Q1L5Z9 754 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 CNGA4Q8IV77 575 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 KSR1Q8IVT5 923 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 MICALL1Q8N3F8 863 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 ACRBPQ8NEB7 543 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 PCMTD1Q96MG8 357 aaPredicted RBP11.76□□□□□ -0.53
TPM3-212ENST00000368533 PANX2Q96RD6 677 aa11.76□□□□□ -0.53
TPM3-212ENST00000368533 CYP3A7-CYP3A51PA0A087WV96 503 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 TFRCP02786 760 aaKnown RBP11.75□□□□□ -0.53
TPM3-212ENST00000368533 IBSPP21815 317 aaPredicted RBP11.75□□□□□ -0.53
TPM3-212ENST00000368533 CYP3A7P24462 503 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 KCNJ12Q14500 433 aa11.75□□□□□ -0.53
TPM3-212ENST00000368533 Q4G0T1 1027 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms