RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 PPP4R3CPQ6ZMV5 832 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 TCP11Q8WWU5 503 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 CDHR1Q96JP9 859 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 KRT12Q99456 494 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 KMT5AQ9NQR1 393 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 CD163L1Q9NR16 1453 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 TRIM49BA6NDI0 452 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 TXNRD1Q16881 649 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 FAM160B1Q5W0V3 765 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 OSBPL9Q96SU4 736 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 ADPGKQ9BRR6 497 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 PCIF1Q9H4Z3 704 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 RAB20Q9NX57 234 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 PAIP2BQ9ULR5 123 aaKnown RBP14.38□□□□□ -0.11
PTPRK-204ENST00000368210 LGALS16A8MUM7 142 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 KIF11P52732 1056 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 RASA3Q14644 834 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 MESDQ14696 234 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 HAUS1Q96CS2 278 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 KAZALD1Q96I82 304 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 ANAPC4Q9UJX5 808 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 NDC80O14777 642 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 TBC1D8O95759 1140 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 USP17L10C9JJH3 530 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 MYO1FO00160 1098 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 YARSP54577 528 aaKnown RBP14.37□□□□□ -0.11
PTPRK-204ENST00000368210 ATP2C1P98194 919 aaPredicted RBP14.37□□□□□ -0.11
PTPRK-204ENST00000368210 CTTNQ14247 550 aaKnown RBP14.37□□□□□ -0.11
PTPRK-204ENST00000368210 FYB2Q5VWT5 728 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 CIAPIN1Q6FI81 312 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 SMIM5Q71RC9 77 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 SRBD1Q8N5C6 995 aaKnown RBP14.37□□□□□ -0.11
PTPRK-204ENST00000368210 MORC4Q8TE76 937 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.37□□□□□ -0.11
PTPRK-204ENST00000368210 PCDHA6Q9UN73 950 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 PCDHA8Q9Y5H6 950 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 DIP2BQ9P265 1576 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 FOXN1O15353 648 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 SERPING1P05155 500 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 ADCY8P40145 1251 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 TAF12Q16514 161 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 SUPT20HL1Q3ZLR7 823 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 SLC30A9Q6PML9 568 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 VPS52Q8N1B4 723 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 PVALEFA0A1B0GWK0 134 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 GFPT2O94808 682 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 ANTXR2P58335 489 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 KCTD2Q14681 263 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 DHX40Q8IX18 779 aaKnown RBP14.37□□□□□ -0.11
PTPRK-204ENST00000368210 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.37□□□□□ -0.11
PTPRK-204ENST00000368210 GRK7Q8WTQ7 553 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 PARD6BQ9BYG5 372 aa14.37□□□□□ -0.11
PTPRK-204ENST00000368210 EIF2AK2P19525 551 aaKnown RBP14.36□□□□□ -0.11
PTPRK-204ENST00000368210 POLR2BP30876 1174 aaKnown RBP14.36□□□□□ -0.11
PTPRK-204ENST00000368210 CXCR5P32302 372 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 PIK3CAP42336 1068 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 NKX1-1Q15270 411 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-204ENST00000368210 HHATQ5VTY9 493 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 STAG2Q8N3U4 1231 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 VPS37BQ9H9H4 285 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 PPP1R9AQ9ULJ8 1098 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 ZMYND10O75800 440 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 MOCS3O95396 460 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 ORC2Q13416 577 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-204ENST00000368210 TMED1Q13445 227 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 HADHQ16836 314 aaKnown RBP14.36□□□□□ -0.11
PTPRK-204ENST00000368210 RNF14Q9UBS8 474 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.36□□□□□ -0.11
PTPRK-204ENST00000368210 PCDHA13Q9Y5I0 950 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 TXNDC9O14530 226 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 ATF7P17544 494 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-204ENST00000368210 IRX4P78413 519 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 CFAP157Q5JU67 520 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 SLC27A3Q5K4L6 730 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 PPP1R18Q6NYC8 613 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 MARCH10Q8NA82 808 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-204ENST00000368210 ZNF341Q9BYN7 854 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 TMEM260Q9NX78 707 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 SLC5A4Q9NY91 659 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 ADAMTS1Q9UHI8 967 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 PP2D1A8MPX8 630 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 M0QZ92 97 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 TMOD1P28289 359 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 CHCHD3Q9NX63 227 aaKnown RBP14.36□□□□□ -0.11
PTPRK-204ENST00000368210 VWDEQ8N2E2 1590 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 NEURL4Q96JN8 1562 aa14.36□□□□□ -0.11
PTPRK-204ENST00000368210 FTCDO95954 541 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 MXI1P50539 228 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 ZNF131P52739 623 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 HIBCHQ6NVY1 386 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-204ENST00000368210 CCDC197Q8NCU1 140 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 MMS19Q96T76 1030 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 ADD3Q9UEY8 706 aaKnown RBP14.35□□□□□ -0.11
PTPRK-204ENST00000368210 FBXO2Q9UK22 296 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-204ENST00000368210 SKIP12755 728 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 LGSNQ5TDP6 509 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 RCSD1Q6JBY9 416 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 CCDC62Q6P9F0 684 aa14.35□□□□□ -0.11
PTPRK-204ENST00000368210 GJD4Q96KN9 370 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-204ENST00000368210 ABHD10Q9NUJ1 306 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms