RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 MESDQ14696 234 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 MGARPQ8TDB4 240 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.74□□□□□ -0.854e-7■■■■■ 58.1
SYNE1-205ENST00000367251 RABEP2Q9H5N1 569 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 ZNF148Q9UQR1 794 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 PFDN6O15212 129 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 TMEM179Q6ZVK1 233 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 TRIM50Q86XT4 487 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 RBM46Q8TBY0 533 aaKnown RBP9.74□□□□□ -0.85
SYNE1-205ENST00000367251 ZBTB9Q96C00 473 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 FAM20AQ96MK3 541 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 KMT5AQ9NQR1 393 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 SLC8A2Q9UPR5 921 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 CDR2Q01850 454 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 CYP4A11Q02928 519 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 LRRC41Q15345 812 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 KIAA0825Q8IV33 1275 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 CCDC68Q9H2F9 335 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 Q9H521 79 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 ZNF277Q9NRM2 450 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-205ENST00000367251 PIK3C2BO00750 1634 aa9.74□□□□□ -0.85
SYNE1-205ENST00000367251 SGO2Q562F6 1265 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 ENAHQ8N8S7 591 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-205ENST00000367251 SYNDIG1Q9H7V2 258 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 LIMA1Q9UHB6 759 aaKnown RBP9.73□□□□□ -0.85
SYNE1-205ENST00000367251 MRFAP1Q9Y605 127 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 ADGRG1Q9Y653 693 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 CASQ2O14958 399 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-205ENST00000367251 PPP1R12AO14974 1030 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-205ENST00000367251 ZBTB5O15062 677 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 XPOTO43592 962 aaKnown RBP9.73□□□□□ -0.85
SYNE1-205ENST00000367251 NR1D1P20393 614 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 TMOD1P28289 359 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 ARPP19P56211 112 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 DR1Q01658 176 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 CAV1Q03135 178 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 ATG9AQ7Z3C6 839 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 GPIHBP1Q8IV16 184 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 KCNB2Q92953 911 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 RILPQ96NA2 401 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 BARHL2Q9NY43 387 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 KIF3CO14782 793 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 DLATP10515 647 aaKnown RBP9.73□□□□□ -0.85
SYNE1-205ENST00000367251 DHX9Q08211 1270 aaKnown RBP9.73□□□□□ -0.85
SYNE1-205ENST00000367251 DOK7Q18PE1 504 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 KCTD1Q719H9 257 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 RSRC2Q7L4I2 434 aaKnown RBP9.73□□□□□ -0.85
SYNE1-205ENST00000367251 CTAGE3PQ8IX95 158 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 ANKRD36BP1Q96IX9 119 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 ANAPC5Q9UJX4 755 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 PCDHB4Q9Y5E5 795 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 SYNGAP1Q96PV0 1343 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 TCP10L2B9ZVM9 353 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 HNRNPDLO14979 420 aaKnown RBP9.73□□□□□ -0.85
SYNE1-205ENST00000367251 MAP3K7O43318 606 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 IFNB1P01574 187 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 NPR1P16066 1061 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 LIG3P49916 1009 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 CCDC144BQ3MJ40 725 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 USP17L2Q6R6M4 530 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 GUF1Q8N442 669 aaKnown RBP9.73□□□□□ -0.85
SYNE1-205ENST00000367251 RNF217Q8TC41 542 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 COA7Q96BR5 231 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 TMEM106CQ9BVX2 250 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 SEL1LQ9UBV2 794 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 SCINQ9Y6U3 715 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 CLTCQ00610 1675 aaKnown RBP9.73□□□□□ -0.85
SYNE1-205ENST00000367251 CDC27P30260 824 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 JAK3P52333 1124 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 RPS6KA2Q15349 733 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 SLFN12LQ6IEE8 588 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 ALKBH5Q6P6C2 394 aaKnown RBP9.73□□□□□ -0.85
SYNE1-205ENST00000367251 SHC4Q6S5L8 630 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 NUF2Q9BZD4 464 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 RIPOR2Q9Y4F9 1068 aa9.73□□□□□ -0.85
SYNE1-205ENST00000367251 GSG1L2A8MUP6 293 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 CYP19A1P11511 503 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-205ENST00000367251 ADRA2BP18089 450 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 KCTD2Q14681 263 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 MUM1Q2TAK8 710 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 CCDC127Q96BQ5 260 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 UIMC1Q96RL1 719 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 FMO2Q99518 471 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 SLC7A5P2Q9GIP4 190 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 KIAA1586Q9HCI6 787 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 TXLNGQ9NUQ3 528 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 NARFQ9UHQ1 456 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 A0A087WWV3 80 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 GFPT2O94808 682 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 MXI1P50539 228 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 IGBP1P78318 339 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 HLFQ16534 295 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 FAM196AQ6ZSG2 479 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 FASTKD5Q7L8L6 764 aaKnown RBP9.72□□□□□ -0.85
SYNE1-205ENST00000367251 GBP7Q8N8V2 638 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-205ENST00000367251 DYNLL2Q96FJ2 89 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-205ENST00000367251 TUBE1Q9UJT0 475 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 TRPC5Q9UL62 973 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-205ENST00000367251 ZNF609O15014 1411 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms