RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 CCDC62Q6P9F0 684 aa13.66□□□□□ -0.22
CAPN9-203ENST00000366666 MAMDC4Q6UXC1 1216 aa13.66□□□□□ -0.22
CAPN9-203ENST00000366666 TRMT1LQ7Z2T5 733 aaKnown RBP13.66□□□□□ -0.22
CAPN9-203ENST00000366666 TPH2Q8IWU9 490 aa13.66□□□□□ -0.22
CAPN9-203ENST00000366666 PIGOQ8TEQ8 1089 aa13.66□□□□□ -0.22
CAPN9-203ENST00000366666 CDK5RAP3Q96JB5 506 aa13.66□□□□□ -0.22
CAPN9-203ENST00000366666 TINF2Q9BSI4 451 aa13.66□□□□□ -0.22
CAPN9-203ENST00000366666 TSKSQ9UJT2 592 aa13.66□□□□□ -0.22
CAPN9-203ENST00000366666 DDX41Q9UJV9 622 aaKnown RBP13.66□□□□□ -0.22
CAPN9-203ENST00000366666 ADCY6O43306 1168 aa13.66□□□□□ -0.22
CAPN9-203ENST00000366666 CYP2C19P33261 490 aa13.66□□□□□ -0.22
CAPN9-203ENST00000366666 ZNF467Q7Z7K2 595 aaPredicted RBP13.66□□□□□ -0.22
CAPN9-203ENST00000366666 KIAA1524Q8TCG1 905 aa13.66□□□□□ -0.22
CAPN9-203ENST00000366666 SH2D3AQ9BRG2 576 aa13.66□□□□□ -0.22
CAPN9-203ENST00000366666 JPH1Q9HDC5 661 aaPredicted RBP13.66□□□□□ -0.22
CAPN9-203ENST00000366666 KBTBD4Q9NVX7 518 aa13.66□□□□□ -0.22
CAPN9-203ENST00000366666 SLC9A2Q9UBY0 812 aa13.66□□□□□ -0.22
CAPN9-203ENST00000366666 DIS3Q9Y2L1 958 aaKnown RBP13.66□□□□□ -0.22
CAPN9-203ENST00000366666 TMEM150BA6NC51 233 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 CTAGE5O15320 804 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 FARP2O94887 1054 aaPredicted RBP13.65□□□□□ -0.22
CAPN9-203ENST00000366666 GGPS1O95749 300 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 BMP6P22004 513 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 ADCYAP1R1P41586 468 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 ACTR2P61160 394 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 SP3Q02447 781 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 DPYDQ12882 1025 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 EPHA7Q15375 998 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 HAUS3Q68CZ6 603 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 LARP4BQ92615 738 aaKnown RBP13.65□□□□□ -0.22
CAPN9-203ENST00000366666 RAD54LQ92698 747 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 CDHR1Q96JP9 859 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 LXNQ9BS40 222 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 POLR3CQ9BUI4 534 aaPredicted RBP13.65□□□□□ -0.22
CAPN9-203ENST00000366666 DNAH12Q6ZR08 3092 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 HOXC6P09630 235 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 TYRO3Q06418 890 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 REM2Q8IYK8 340 aaPredicted RBP13.65□□□□□ -0.22
CAPN9-203ENST00000366666 ERMNQ8TAM6 284 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 SENP7Q9BQF6 1050 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 TUBE1Q9UJT0 475 aa13.65□□□□□ -0.22
CAPN9-203ENST00000366666 NFASCO94856 1347 aa13.65□□□□□ -0.23
CAPN9-203ENST00000366666 MYMKA6NI61 221 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 B4DLN1 442 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 TXNP10599 105 aaKnown RBP13.64□□□□□ -0.23
CAPN9-203ENST00000366666 SARSP49591 514 aaKnown RBP13.64□□□□□ -0.23
CAPN9-203ENST00000366666 FCGRTP55899 365 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 KRT76Q01546 638 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 PRKCZQ05513 592 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 HSDL1Q3SXM5 330 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 CCDC60Q8IWA6 550 aaPredicted RBP13.64□□□□□ -0.23
CAPN9-203ENST00000366666 CD99L2Q8TCZ2 262 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 MPHOSPH6Q99547 160 aaKnown RBP13.64□□□□□ -0.23
CAPN9-203ENST00000366666 CFHR5Q9BXR6 569 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 POLD4Q9HCU8 107 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 SYNGAP1Q96PV0 1343 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 KDM3AQ9Y4C1 1321 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 NPHP3-ACAD11A0A0J9YXS1 232 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 IGHA2P01877 340 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 SSBP05455 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
CAPN9-203ENST00000366666 TGFB3P10600 412 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 FLT3LGP49771 235 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 DPCR1Q3MIW9 517 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 ZNF746Q6NUN9 644 aaPredicted RBP13.64□□□□□ -0.23
CAPN9-203ENST00000366666 ELOA2Q8IYF1 753 aaPredicted RBP13.64□□□□□ -0.23
CAPN9-203ENST00000366666 SPATA20Q8TB22 786 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 FAM200AQ8TCP9 573 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 LENG1Q96BZ8 264 aaPredicted RBP13.64□□□□□ -0.23
CAPN9-203ENST00000366666 NT5C3AQ9H0P0 336 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 TUFT1Q9NNX1 390 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 STK17AQ9UEE5 414 aa13.64□□□□□ -0.23
CAPN9-203ENST00000366666 ARID2Q68CP9 1835 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 LOC102724159A0A0B4J2E5 919 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 GSTTP1A0A1W2PQM5 241 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 WDR64B1ANS9 1081 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 ZNF862O60290 1169 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 PLA2G4BP0C869 781 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 HSPA6P17066 643 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 RGS2P41220 211 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 SLC12A3P55017 1021 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 CACNB1Q02641 598 aaPredicted RBP13.63□□□□□ -0.23
CAPN9-203ENST00000366666 RAD51AP2Q09MP3 1159 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 ACVR2BQ13705 512 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 PWP2Q15269 919 aaKnown RBP13.63□□□□□ -0.23
CAPN9-203ENST00000366666 SWSAP1Q6NVH7 229 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 KANK3Q6NY19 840 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 ABHD15Q6UXT9 468 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 C11orf57Q6ZUT1 292 aaPredicted RBP13.63□□□□□ -0.23
CAPN9-203ENST00000366666 DYMQ7RTS9 669 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 IPO4Q8TEX9 1081 aaKnown RBP13.63□□□□□ -0.23
CAPN9-203ENST00000366666 APBA2Q99767 749 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 TRIM9Q9C026 710 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 BHMT2Q9H2M3 363 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 MAN1B1Q9UKM7 699 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 PCDHA10Q9Y5I2 948 aa13.63□□□□□ -0.23
CAPN9-203ENST00000366666 GPR25O00155 361 aa13.62□□□□□ -0.23
CAPN9-203ENST00000366666 GTPBP6O43824 516 aaPredicted RBP13.62□□□□□ -0.23
CAPN9-203ENST00000366666 KLRC4O43908 158 aa13.62□□□□□ -0.23
CAPN9-203ENST00000366666 P4HBP07237 508 aaKnown RBP13.62□□□□□ -0.23
CAPN9-203ENST00000366666 C1QTNF8P60827 252 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms