RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 FAM155AB1AL88 458 aaPredicted RBP9.79□□□□□ -0.84
YBX3-204ENST00000366290 VAMP4O75379 141 aa9.79□□□□□ -0.84
YBX3-204ENST00000366290 ITIH2P19823 946 aa9.79□□□□□ -0.84
YBX3-204ENST00000366290 CD97P48960 835 aa9.79□□□□□ -0.84
YBX3-204ENST00000366290 NMIQ13287 307 aaPredicted RBP9.79□□□□□ -0.84
YBX3-204ENST00000366290 C2orf27AQ580R0 203 aa9.79□□□□□ -0.84
YBX3-204ENST00000366290 RTKN2Q8IZC4 609 aa9.79□□□□□ -0.84
YBX3-204ENST00000366290 FAM177A1Q8N128 213 aaPredicted RBP9.79□□□□□ -0.84
YBX3-204ENST00000366290 LRRN4CLQ8ND94 238 aa9.79□□□□□ -0.84
YBX3-204ENST00000366290 ASCC2Q9H1I8 757 aaPredicted RBP9.79□□□□□ -0.84
YBX3-204ENST00000366290 TAOK3Q9H2K8 898 aa9.79□□□□□ -0.84
YBX3-204ENST00000366290 MKNK2Q9HBH9 465 aa9.79□□□□□ -0.84
YBX3-204ENST00000366290 SIGLEC6O43699 453 aa9.78□□□□□ -0.84
YBX3-204ENST00000366290 DDX58O95786 925 aaKnown RBP9.78□□□□□ -0.84
YBX3-204ENST00000366290 ITGAVP06756 1048 aa9.78□□□□□ -0.84
YBX3-204ENST00000366290 VEGFAP15692 232 aaPredicted RBP9.78□□□□□ -0.84
YBX3-204ENST00000366290 NKPD1Q17RQ9 610 aa9.78□□□□□ -0.84
YBX3-204ENST00000366290 CCDC93Q567U6 631 aa9.78□□□□□ -0.84
YBX3-204ENST00000366290 KSR2Q6VAB6 950 aa9.78□□□□□ -0.84
YBX3-204ENST00000366290 ZNF227Q86WZ6 799 aa9.78□□□□□ -0.84
YBX3-204ENST00000366290 C16orf71Q8IYS4 520 aaPredicted RBP9.78□□□□□ -0.84
YBX3-204ENST00000366290 SMC1BQ8NDV3 1235 aa9.78□□□□□ -0.84
YBX3-204ENST00000366290 SYTL5Q8TDW5 730 aaPredicted RBP9.78□□□□□ -0.84
YBX3-204ENST00000366290 THAP3Q8WTV1 239 aaPredicted RBP9.78□□□□□ -0.84
YBX3-204ENST00000366290 RPGRQ92834 1020 aaKnown RBP9.78□□□□□ -0.84
YBX3-204ENST00000366290 RBM17Q96I25 401 aaKnown RBP9.78□□□□□ -0.84
YBX3-204ENST00000366290 RCC1LQ96I51 464 aaKnown RBP9.78□□□□□ -0.84
YBX3-204ENST00000366290 YTHDC1Q96MU7 727 aaKnown RBP9.78□□□□□ -0.84
YBX3-204ENST00000366290 LGR4Q9BXB1 951 aa9.78□□□□□ -0.84
YBX3-204ENST00000366290 TRMT112Q9UI30 125 aaKnown RBP9.78□□□□□ -0.84
YBX3-204ENST00000366290 LEMD3Q9Y2U8 911 aa9.78□□□□□ -0.84
YBX3-204ENST00000366290 A0A1W2PQU0 124 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 SHISA3A0PJX4 238 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 PRR19A6NJB7 356 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 ADCY3O60266 1144 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 PRAMEF1O95521 474 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 CEACAM5P06731 702 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 SF3B3Q15393 1217 aaKnown RBP9.77□□□□□ -0.85
YBX3-204ENST00000366290 SPACA3Q8IXA5 215 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 SYNE4Q8N205 404 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 ARHGEF39Q8N4T4 335 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 FIBCD1Q8N539 461 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 CCDC191Q8NCU4 936 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 BVESQ8NE79 360 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 PSMD1Q99460 953 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 DSCC1Q9BVC3 393 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 STK31Q9BXU1 1019 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 GPR62Q9BZJ7 368 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 NOL6Q9H6R4 1146 aaKnown RBP9.77□□□□□ -0.85
YBX3-204ENST00000366290 CGGBP1Q9UFW8 167 aaPredicted RBP9.77□□□□□ -0.85
YBX3-204ENST00000366290 AKT3Q9Y243 479 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 ST14Q9Y5Y6 855 aa9.77□□□□□ -0.85
YBX3-204ENST00000366290 LRRC37AA6NMS7 1700 aa9.76□□□□□ -0.85
YBX3-204ENST00000366290 NOP56O00567 594 aaKnown RBP9.76□□□□□ -0.85
YBX3-204ENST00000366290 CYP26A1O43174 497 aa9.76□□□□□ -0.85
YBX3-204ENST00000366290 BBOX1O75936 387 aa9.76□□□□□ -0.85
YBX3-204ENST00000366290 MED26O95402 600 aa9.76□□□□□ -0.85
YBX3-204ENST00000366290 FAM153BP0C7A2 387 aa9.76□□□□□ -0.85
YBX3-204ENST00000366290 CLEC16AQ2KHT3 1053 aa9.76□□□□□ -0.85
YBX3-204ENST00000366290 CDKAL1Q5VV42 579 aa9.76□□□□□ -0.85
YBX3-204ENST00000366290 ZBTB38Q8NAP3 1195 aaPredicted RBP9.76□□□□□ -0.85
YBX3-204ENST00000366290 CHST7Q9NS84 486 aa9.76□□□□□ -0.85
YBX3-204ENST00000366290 MINPP1Q9UNW1 487 aa9.76□□□□□ -0.85
YBX3-204ENST00000366290 PLAGL2Q9UPG8 496 aa9.76□□□□□ -0.85
YBX3-204ENST00000366290 EMC9Q9Y3B6 208 aa9.76□□□□□ -0.85
YBX3-204ENST00000366290 ATP6V0A2Q9Y487 856 aa9.76□□□□□ -0.85
YBX3-204ENST00000366290 ABCC4O15439 1325 aa9.76□□□□□ -0.85
YBX3-204ENST00000366290 TAF1P21675 1872 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 PI4KAP2A4QPH2 592 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 TCERG1O14776 1098 aaKnown RBP9.75□□□□□ -0.85
YBX3-204ENST00000366290 PCCAP05165 728 aaPredicted RBP9.75□□□□□ -0.85
YBX3-204ENST00000366290 SRFP11831 508 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 HSP90B1P14625 803 aaKnown RBP9.75□□□□□ -0.85
YBX3-204ENST00000366290 SSTR4P31391 388 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 PPP2R2AP63151 447 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 SQSTM1Q13501 440 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 PPP2R5DQ14738 602 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 POMZP3Q6PJE2 187 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 OLFM4Q6UX06 510 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 PI4KAP1Q8N8J0 262 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 FAM89AQ96GI7 184 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 MRGPRX3Q96LB0 322 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 HDAC8Q9BY41 377 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 DUSP15Q9H1R2 295 aaPredicted RBP9.75□□□□□ -0.85
YBX3-204ENST00000366290 CWC22Q9HCG8 908 aaKnown RBP9.75□□□□□ -0.85
YBX3-204ENST00000366290 ARHGEF4Q9NR80 690 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 CWC25Q9NXE8 425 aaPredicted RBP9.75□□□□□ -0.85
YBX3-204ENST00000366290 DIS3Q9Y2L1 958 aaKnown RBP9.75□□□□□ -0.85
YBX3-204ENST00000366290 MAP3K2Q9Y2U5 619 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 PTCH2Q9Y6C5 1203 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 MYH3P11055 1940 aa9.75□□□□□ -0.85
YBX3-204ENST00000366290 ESYT3A0FGR9 886 aa9.74□□□□□ -0.85
YBX3-204ENST00000366290 KIAA1324LA8MWY0 1029 aaPredicted RBP9.74□□□□□ -0.85
YBX3-204ENST00000366290 MEIS1O00470 390 aa9.74□□□□□ -0.85
YBX3-204ENST00000366290 ENPP3O14638 875 aa9.74□□□□□ -0.85
YBX3-204ENST00000366290 IGKV5-2P06315 115 aa9.74□□□□□ -0.85
YBX3-204ENST00000366290 HSP90AA2PQ14568 343 aaPredicted RBP9.74□□□□□ -0.85
YBX3-204ENST00000366290 G2E3Q7L622 706 aa9.74□□□□□ -0.85
YBX3-204ENST00000366290 TRIM59Q8IWR1 403 aa9.74□□□□□ -0.85
YBX3-204ENST00000366290 SP8Q8IXZ3 490 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms