RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ENO2P09104 434 aaPredicted RBP6.76□□□□□ -1.33
RNU4-28P-201ENST00000364739 ZNF28P17035 718 aa6.76□□□□□ -1.33
RNU4-28P-201ENST00000364739 DBPQ10586 325 aaPredicted RBP6.76□□□□□ -1.33
RNU4-28P-201ENST00000364739 TRMT10BQ6PF06 316 aaKnown RBP6.76□□□□□ -1.33
RNU4-28P-201ENST00000364739 TACO1Q9BSH4 297 aaKnown RBP6.76□□□□□ -1.33
RNU4-28P-201ENST00000364739 CELF4Q9BZC1 486 aaKnown RBP6.76□□□□□ -1.33
RNU4-28P-201ENST00000364739 PDGFDQ9GZP0 370 aaPredicted RBP6.76□□□□□ -1.33
RNU4-28P-201ENST00000364739 L2HGDHQ9H9P8 463 aa6.76□□□□□ -1.33
RNU4-28P-201ENST00000364739 DLL4Q9NR61 685 aa6.76□□□□□ -1.33
RNU4-28P-201ENST00000364739 ZFP69BQ9UJL9 534 aa6.76□□□□□ -1.33
RNU4-28P-201ENST00000364739 PRAMEF25A6NGN4 478 aa6.75□□□□□ -1.33
RNU4-28P-201ENST00000364739 IL18BPO95998 194 aa6.75□□□□□ -1.33
RNU4-28P-201ENST00000364739 CYP1A1P04798 512 aaPredicted RBP6.75□□□□□ -1.33
RNU4-28P-201ENST00000364739 GJA9P57773 515 aa6.75□□□□□ -1.33
RNU4-28P-201ENST00000364739 TKFCQ3LXA3 575 aa6.75□□□□□ -1.33
RNU4-28P-201ENST00000364739 FNDC3BQ53EP0 1204 aaKnown RBP6.75□□□□□ -1.33
RNU4-28P-201ENST00000364739 TMEM177Q53S58 311 aa6.75□□□□□ -1.33
RNU4-28P-201ENST00000364739 JAZF1Q86VZ6 243 aa6.75□□□□□ -1.33
RNU4-28P-201ENST00000364739 FANCLQ9NW38 375 aa6.75□□□□□ -1.33
RNU4-28P-201ENST00000364739 ARHGAP20Q9P2F6 1191 aa6.75□□□□□ -1.33
RNU4-28P-201ENST00000364739 CD2APQ9Y5K6 639 aa6.75□□□□□ -1.33
RNU4-28P-201ENST00000364739 ZNF839A8K0R7 811 aa6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 M0R2C6 588 aa6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 OPA1O60313 960 aa6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 KRT37O76014 449 aa6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 C4BPAP04003 597 aaKnown RBP6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 COL6A1P12109 1028 aa6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 CNR2P34972 360 aa6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 PABPC4Q13310 644 aaKnown RBP eCLIP6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 NFIXQ14938 502 aa6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 FIGNQ5HY92 759 aa6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 NOSTRINQ8IVI9 506 aa6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 C2orf69Q8N8R5 385 aa6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 NUDT10Q8NFP7 164 aa6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 NUDT11Q96G61 164 aa6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 SAMD15Q9P1V8 674 aa6.74□□□□□ -1.33
RNU4-28P-201ENST00000364739 MROH6A6NGR9 719 aa6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 CLASP2O75122 1294 aaKnown RBP6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 GLRX3O76003 335 aaKnown RBP6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 FBXO21O94952 628 aa6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 APPP05067 770 aa6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 MC4RP32245 332 aa6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 ZCCHC8Q6NZY4 707 aaKnown RBP6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 PKN3Q6P5Z2 889 aa6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 HHIPL2Q6UWX4 724 aa6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 FRMD5Q7Z6J6 570 aa6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 IGDCC4Q8TDY8 1250 aa6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 YTHDC1Q96MU7 727 aaKnown RBP6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 TMEM168Q9H0V1 697 aa6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 ARHGAP28Q9P2N2 729 aa6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 ZDHHC9Q9Y397 364 aa6.73□□□□□ -1.33
RNU4-28P-201ENST00000364739 FOXD2O60548 495 aaPredicted RBP6.72□□□□□ -1.33
RNU4-28P-201ENST00000364739 MMEP08473 750 aa6.72□□□□□ -1.33
RNU4-28P-201ENST00000364739 IGFALSP35858 605 aa6.72□□□□□ -1.33
RNU4-28P-201ENST00000364739 TMEM132BQ14DG7 1078 aa6.72□□□□□ -1.33
RNU4-28P-201ENST00000364739 UBXN11Q5T124 520 aa6.72□□□□□ -1.33
RNU4-28P-201ENST00000364739 KRTAP17-1Q9BYP8 105 aa6.72□□□□□ -1.33
RNU4-28P-201ENST00000364739 UCKL1Q9NWZ5 548 aa6.72□□□□□ -1.33
RNU4-28P-201ENST00000364739 RTEL1Q9NZ71 1219 aa6.72□□□□□ -1.33
RNU4-28P-201ENST00000364739 SLC12A8A0AV02 714 aa6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 RASSF10A6NK89 507 aa6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 TRAF5O00463 557 aa6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 KNG1P01042 644 aa6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 ASLP04424 464 aa6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 JMJD7P0C870 316 aa6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 ZBTB48P10074 688 aaPredicted RBP6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 SMAD2Q15796 467 aaKnown RBP6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 FAM26FQ5R3K3 315 aa6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 PIK3R6Q5UE93 754 aa6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 HOMER1Q86YM7 354 aa6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 LCORQ96JN0 433 aaPredicted RBP6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 KCND1Q9NSA2 647 aa6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 BTBD7Q9P203 1132 aa6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 FTSJ1Q9UET6 329 aa6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 INVSQ9Y283 1065 aa6.71□□□□□ -1.34
RNU4-28P-201ENST00000364739 CYP7B1O75881 506 aa6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 KLHL18O94889 574 aa6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 GJA4P35212 333 aa6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 MECP2P51608 486 aaKnown RBP6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 IRF9Q00978 393 aa6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 KIAA2012Q0VF49 1180 aa6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 TCEA2Q15560 299 aa6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 LRSAM1Q6UWE0 723 aa6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 DBX2Q6ZNG2 339 aa6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 DDX53Q86TM3 631 aaKnown RBP6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 DHX37Q8IY37 1157 aaKnown RBP6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 APPBP2Q92624 585 aa6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 ERCC4Q92889 916 aaPredicted RBP6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 MBD6Q96DN6 1003 aa6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 TEPSINQ96N21 525 aa6.7□□□□□ -1.34
RNU4-28P-201ENST00000364739 PRAMEF22A3QJZ6 481 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 DVL2O14641 736 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 B4GALT3O60512 393 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 B4GALT4O60513 344 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 SYN1P17600 705 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 PTGS1P23219 599 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 AOAHP28039 575 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 CDCA2Q69YH5 1023 aaPredicted RBP6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 C16orf86Q6ZW13 317 aa6.69□□□□□ -1.34
RNU4-28P-201ENST00000364739 ASB15Q8WXK1 588 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms