RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 KCNV1Q6PIU1 500 aa13.22□□□□□ -0.29
DNMT1-202ENST00000359526 FASTKD5Q7L8L6 764 aaKnown RBP13.22□□□□□ -0.29
DNMT1-202ENST00000359526 SMYD4Q8IYR2 804 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-202ENST00000359526 TBCKQ8TEA7 893 aa13.22□□□□□ -0.29
DNMT1-202ENST00000359526 HVCN1Q96D96 273 aa13.22□□□□□ -0.29
DNMT1-202ENST00000359526 TXLNGQ9NUQ3 528 aa13.22□□□□□ -0.29
DNMT1-202ENST00000359526 KIF20BQ96Q89 1820 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 MOCS3O95396 460 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 INHBAP08476 426 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 NDST4Q9H3R1 872 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 ABCB6Q9NP58 842 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 ZSWIM5Q9P217 1185 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.21□□□□□ -0.29
DNMT1-202ENST00000359526 LCMT1Q9UIC8 334 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 BCORL1Q5H9F3 1711 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 LOC102724159A0A0B4J2E5 919 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 SART1O43290 800 aaKnown RBP13.21□□□□□ -0.29
DNMT1-202ENST00000359526 PIK3CAP42336 1068 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 DHX9Q08211 1270 aaKnown RBP13.21□□□□□ -0.29
DNMT1-202ENST00000359526 GRM1Q13255 1194 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 PWP2Q15269 919 aaKnown RBP13.21□□□□□ -0.29
DNMT1-202ENST00000359526 KRT31Q15323 416 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 RPS6KA2Q15349 733 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 ADAT2Q7Z6V5 191 aaKnown RBP13.21□□□□□ -0.29
DNMT1-202ENST00000359526 MRPL47Q9HD33 250 aaKnown RBP13.21□□□□□ -0.29
DNMT1-202ENST00000359526 TMEM232C9JQI7 657 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 TMEM191BP0C7N4 346 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 PTPREP23469 700 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 MAPK4P31152 587 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 NR5A1Q13285 461 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 ARHGEF1Q92888 912 aaKnown RBP13.21□□□□□ -0.29
DNMT1-202ENST00000359526 SLC10A4Q96EP9 437 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 PCDHB6Q9Y5E3 794 aa13.21□□□□□ -0.29
DNMT1-202ENST00000359526 GNAT1P11488 350 aa13.21□□□□□ -0.3
DNMT1-202ENST00000359526 NR1D1P20393 614 aa13.21□□□□□ -0.3
DNMT1-202ENST00000359526 TOB2Q14106 344 aaPredicted RBP13.21□□□□□ -0.3
DNMT1-202ENST00000359526 KMT5BQ4FZB7 885 aa13.21□□□□□ -0.3
DNMT1-202ENST00000359526 SGO2Q562F6 1265 aa13.21□□□□□ -0.3
DNMT1-202ENST00000359526 GRAMD1CQ8IYS0 662 aa13.21□□□□□ -0.3
DNMT1-202ENST00000359526 POMGNT1Q8WZA1 660 aa13.21□□□□□ -0.3
DNMT1-202ENST00000359526 DLATP10515 647 aaKnown RBP13.2□□□□□ -0.3
DNMT1-202ENST00000359526 ALAS1P13196 640 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 C6orf118Q5T5N4 469 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 ZNF653Q96CK0 615 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 HDLBPQ00341 1268 aaKnown RBP13.2□□□□□ -0.3
DNMT1-202ENST00000359526 NAA35Q5VZE5 725 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 SCYL2Q6P3W7 929 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 SYNE4Q8N205 404 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 CCDC127Q96BQ5 260 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 ANAPC5Q9UJX4 755 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 ADAM21Q9UKJ8 722 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 FAF1Q9UNN5 650 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-202ENST00000359526 ATP8B3O60423 1300 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 ZMYND10O75800 440 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 LCORLQ8N3X6 602 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 DISC1Q9NRI5 854 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 ATP8A1Q9Y2Q0 1164 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 AFG3L2Q9Y4W6 797 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-202ENST00000359526 MROH7-TTC4A0A0A0MT08 1334 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 PFDN6O15212 129 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 CTNND1O60716 968 aaKnown RBP13.2□□□□□ -0.3
DNMT1-202ENST00000359526 PLTPP55058 493 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 ADCY2Q08462 1091 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 PROCA1Q8NCQ7 364 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-202ENST00000359526 UHMK1Q8TAS1 419 aaKnown RBP13.2□□□□□ -0.3
DNMT1-202ENST00000359526 FBXO41Q8TF61 875 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 SLC24A3Q9HC58 644 aa13.2□□□□□ -0.3
DNMT1-202ENST00000359526 ZBTB22O15209 634 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 SCP2P22307 547 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 JAK3P52333 1124 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 KCTD17Q8N5Z5 321 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 HAUS8Q9BT25 410 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 PNPLA7Q6ZV29 1317 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 ECE2O60344 883 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 YWHAGP61981 247 aaKnown RBP eCLIP13.19□□□□□ -0.3
DNMT1-202ENST00000359526 DPP9Q86TI2 863 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 FAM133AQ8N9E0 248 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 RBM46Q8TBY0 533 aaKnown RBP13.19□□□□□ -0.3
DNMT1-202ENST00000359526 MORC2Q9Y6X9 1032 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-202ENST00000359526 ANKRD65E5RJM6 399 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 GUCY2CP25092 1073 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 POLGP54098 1239 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-202ENST00000359526 GABPAQ06546 454 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 ASPHQ12797 758 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 PTPROQ16827 1216 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 STRIP1Q5VSL9 837 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 BSPRYQ5W0U4 402 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 NCAPG2Q86XI2 1143 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 RHOT2Q8IXI1 618 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 PNMA6FA0A0J9YX94 578 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 USP17L5A8MUK1 530 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 ENTPD3O75355 529 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 KRT3P12035 628 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 PLCG1P19174 1290 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 CRKP46108 304 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 CYP4A11Q02928 519 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 SAMD3Q8N6K7 520 aa13.19□□□□□ -0.3
DNMT1-202ENST00000359526 H7C0C1 242 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms