RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 NIPA1Q7RTP0 329 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 ATRIPQ8WXE1 791 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 UBXN4Q92575 508 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 HOOK2Q96ED9 719 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 TEKT3Q9BXF9 490 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 IRX2Q9BZI1 471 aaPredicted RBP16.45■□□□□ 0.22
GABPB1-202ENST00000359031 BHMT2Q9H2M3 363 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 ZHX3Q9H4I2 956 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 MAP3K20Q9NYL2 800 aaKnown RBP16.45■□□□□ 0.22
GABPB1-202ENST00000359031 TRAF3IP3Q9Y228 551 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 DICER1Q9UPY3 1922 aaKnown RBP16.45■□□□□ 0.22
GABPB1-202ENST00000359031 TMEM88BA6NKF7 163 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 CETN3O15182 167 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 BCRP11274 1271 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 GMPSP49915 693 aaPredicted RBP16.45■□□□□ 0.22
GABPB1-202ENST00000359031 HERVK_113P62684 666 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 RAD51AP2Q09MP3 1159 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 ERCC6LQ2NKX8 1250 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 DCAF15Q66K64 600 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 TRIM59Q8IWR1 403 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 MICALL2Q8IY33 904 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 SLC35F6Q8N357 371 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 EHBP1Q8NDI1 1231 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 NEK11Q8NG66 645 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 RIT2Q99578 217 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 NAPGQ99747 312 aaPredicted RBP16.45■□□□□ 0.22
GABPB1-202ENST00000359031 MXRA8Q9BRK3 442 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 ZNF577Q9BSK1 485 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 RUSC1Q9BVN2 902 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 TANGO6Q9C0B7 1094 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 TAF1DQ9H5J8 278 aaPredicted RBP16.45■□□□□ 0.22
GABPB1-202ENST00000359031 NHEJ1Q9H9Q4 299 aaPredicted RBP16.45■□□□□ 0.22
GABPB1-202ENST00000359031 OLFML3Q9NRN5 406 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 PLAGL2Q9UPG8 496 aa16.45■□□□□ 0.22
GABPB1-202ENST00000359031 FRMPD4Q14CM0 1322 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 CALUO43852 315 aaPredicted RBP16.44■□□□□ 0.22
GABPB1-202ENST00000359031 EGFRP00533 1210 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 VEGFBP49765 207 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 USP14P54578 494 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 EPHA7Q15375 998 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 KNOP1Q1ED39 458 aaKnown RBP16.44■□□□□ 0.22
GABPB1-202ENST00000359031 SAMD1Q6SPF0 538 aaPredicted RBP16.44■□□□□ 0.22
GABPB1-202ENST00000359031 B3GNT9Q6UX72 402 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 CLEC4DQ8WXI8 215 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 DYDC2Q96IM9 177 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 AGBL1Q96MI9 1066 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 MMRN2Q9H8L6 949 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 SLC38A10Q9HBR0 1119 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 RGL1Q9NZL6 768 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 KCND2Q9NZV8 630 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 UBE4BO95155 1302 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 PASKQ96RG2 1323 aa16.44■□□□□ 0.22
GABPB1-202ENST00000359031 FZD9O00144 591 aa16.43■□□□□ 0.22
GABPB1-202ENST00000359031 PDXKO00764 312 aa16.43■□□□□ 0.22
GABPB1-202ENST00000359031 EIF3DO15371 548 aaKnown RBP eCLIP16.43■□□□□ 0.22
GABPB1-202ENST00000359031 SLITRK3O94933 977 aa16.43■□□□□ 0.22
GABPB1-202ENST00000359031 FDX1P10109 184 aa16.43■□□□□ 0.22
GABPB1-202ENST00000359031 H2AFXP16104 143 aaPredicted RBP16.43■□□□□ 0.22
GABPB1-202ENST00000359031 CASP5P51878 434 aa16.43■□□□□ 0.22
GABPB1-202ENST00000359031 UBXN2AP68543 259 aa16.43■□□□□ 0.22
GABPB1-202ENST00000359031 CTTNQ14247 550 aaKnown RBP16.43■□□□□ 0.22
GABPB1-202ENST00000359031 RINT1Q6NUQ1 792 aa16.43■□□□□ 0.22
GABPB1-202ENST00000359031 FBXO38Q6PIJ6 1188 aa16.43■□□□□ 0.22
GABPB1-202ENST00000359031 KIAA1328Q86T90 577 aa16.43■□□□□ 0.22
GABPB1-202ENST00000359031 NUCKS1Q9H1E3 243 aaKnown RBP16.43■□□□□ 0.22
GABPB1-202ENST00000359031 FAM207AQ9NSI2 230 aaPredicted RBP16.43■□□□□ 0.22
GABPB1-202ENST00000359031 HACL1Q9UJ83 578 aa16.43■□□□□ 0.22
GABPB1-202ENST00000359031 CDC23Q9UJX2 597 aa16.43■□□□□ 0.22
GABPB1-202ENST00000359031 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.43■□□□□ 0.22
GABPB1-202ENST00000359031 PHIPQ8WWQ0 1821 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 CHMP2AO43633 222 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 NR2F2P24468 414 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 ADAM9Q13443 819 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 PDXDC1Q6P996 788 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 FRMD5Q7Z6J6 570 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 TPH2Q8IWU9 490 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 CEP112Q8N8E3 955 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 BAP1Q92560 729 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 JAKMIP2Q96AA8 810 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 L3MBTL3Q96JM7 780 aaPredicted RBP16.42■□□□□ 0.22
GABPB1-202ENST00000359031 NACC1Q96RE7 527 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 TSGA10Q9BZW7 698 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 UNC45AQ9H3U1 944 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 TYW1Q9NV66 732 aaKnown RBP16.42■□□□□ 0.22
GABPB1-202ENST00000359031 CEP72Q9P209 647 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 SEL1LQ9UBV2 794 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 PPP1R9AQ9ULJ8 1098 aa16.42■□□□□ 0.22
GABPB1-202ENST00000359031 IPO5O00410 1097 aaKnown RBP16.41■□□□□ 0.22
GABPB1-202ENST00000359031 EPHB6O15197 1021 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 SLC16A3O15427 465 aaKnown RBP16.41■□□□□ 0.22
GABPB1-202ENST00000359031 KRT86O43790 486 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 FAM13AO94988 1023 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 MYBP10242 640 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 ARP10275 920 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 LBX1P52954 281 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 C1orf186Q6ZWK4 172 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 GOLGA1Q92805 767 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 CCDC42Q96M95 316 aa16.41■□□□□ 0.22
GABPB1-202ENST00000359031 CNOT7Q9UIV1 285 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms