RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 CFAP221Q4G0U5 840 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 KLHDC7AQ5VTJ3 777 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 MAATS1Q7Z4T9 603 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 FAM76AQ8TAV0 307 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 U2AF1L4Q8WU68 220 aaKnown RBP9.08□□□□□ -0.96
CD46-205ENST00000358170 CSRNP1Q96S65 589 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 RUSC1Q9BVN2 902 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 CASZ1Q86V15 1759 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 A0A1W2PQJ5 194 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 ANO9A1A5B4 782 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 EML1O00423 815 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 FAM13AO94988 1023 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 SERPING1P05155 500 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 FAM153BP0C7A2 387 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 XRCC5P13010 732 aaKnown RBP9.07□□□□□ -0.96
CD46-205ENST00000358170 POLD1P28340 1107 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 FAM153CQ494X1 144 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 HGSNATQ68CP4 663 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 DDX42Q86XP3 938 aaKnown RBP eCLIP9.07□□□□□ -0.961e-9■■■□□ 17.6
CD46-205ENST00000358170 TSEN2Q8NCE0 465 aaKnown RBP9.07□□□□□ -0.96
CD46-205ENST00000358170 ERMNQ8TAM6 284 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 CRAMP1Q96RY5 1269 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 LUC7LQ9NQ29 371 aaKnown RBP9.07□□□□□ -0.96
CD46-205ENST00000358170 HOMER2Q9NSB8 354 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 PI4KBQ9UBF8 816 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 SWAP70Q9UH65 585 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 FAM153AQ9UHL3 310 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 MEIS2O14770 477 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 PSMD2Q13200 908 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 COG2Q14746 738 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 HAUS3Q68CZ6 603 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 GOLGA5Q8TBA6 731 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 ACER1Q8TDN7 264 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 ARL8AQ96BM9 186 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 CCDC43Q96MW1 224 aaKnown RBP9.07□□□□□ -0.96
CD46-205ENST00000358170 CEP72Q9P209 647 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 STIM2Q9P246 746 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 SAMM50Q9Y512 469 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 CCDC88AQ3V6T2 1871 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 LRRN2O75325 713 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 AKAP3O75969 853 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 TUBBP07437 444 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 TRIM49P0CI25 452 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 TRIM49CP0CI26 452 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 SNHG28P0DPA3 235 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 SMARCA1P28370 1054 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 HPDP32754 393 aaPredicted RBP9.07□□□□□ -0.96
CD46-205ENST00000358170 FIGNQ5HY92 759 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 RBM26Q5T8P6 1007 aaKnown RBP9.07□□□□□ -0.96
CD46-205ENST00000358170 SH3BP5LQ7L8J4 393 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 COL23A1Q86Y22 540 aaPredicted RBP9.07□□□□□ -0.96
CD46-205ENST00000358170 CPXCR1Q8N123 301 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 CERKQ8TCT0 537 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 ELMO3Q96BJ8 720 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 PCIF1Q9H4Z3 704 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 MED4Q9NPJ6 270 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 FAM184BQ9ULE4 1060 aa9.07□□□□□ -0.96
CD46-205ENST00000358170 TMEM110-MUSTN1A8MSY1 372 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 HSF2BPO75031 334 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 RAD17O75943 681 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 CCT5P48643 541 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 MKRN4PQ13434 485 aaPredicted RBP9.06□□□□□ -0.96
CD46-205ENST00000358170 GIT2Q14161 759 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 RPS6KA1Q15418 735 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 TRIM59Q8IWR1 403 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 SYCP3Q8IZU3 236 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 RPGRIP1Q96KN7 1286 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 PRMT6Q96LA8 375 aaPredicted RBP9.06□□□□□ -0.96
CD46-205ENST00000358170 PODXL2Q9NZ53 605 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 FAM198AQ9UFP1 575 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 RRP15Q9Y3B9 282 aaKnown RBP9.06□□□□□ -0.96
CD46-205ENST00000358170 RABGAP1Q9Y3P9 1069 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 KDM3AQ9Y4C1 1321 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 SCN7AQ01118 1682 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 MYO1CO00159 1063 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 MSH4O15457 936 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 APBA3O96018 575 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 BMP3P12645 472 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 GCFC2P16383 781 aaKnown RBP9.06□□□□□ -0.96
CD46-205ENST00000358170 COPB2P35606 906 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 KNOP1Q1ED39 458 aaKnown RBP9.06□□□□□ -0.96
CD46-205ENST00000358170 SYDE2Q5VT97 1194 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 ALKBH5Q6P6C2 394 aaKnown RBP9.06□□□□□ -0.96
CD46-205ENST00000358170 LRRC31Q6UY01 552 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 C15orf52Q6ZUT6 534 aaKnown RBP9.06□□□□□ -0.96
CD46-205ENST00000358170 ZNF571Q7Z3V5 609 aaPredicted RBP9.06□□□□□ -0.96
CD46-205ENST00000358170 DYDC2Q96IM9 177 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 FBXO28Q9NVF7 368 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 GCNT4Q9P109 453 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 IGKV6D-41A0A0C4DH26 115 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 A0A1W2PRG0 241 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 hCG_1984214I3L0E3 225 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 AGPSO00116 658 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 ECE2O60344 883 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 SORBS3O60504 671 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 NR3C1P04150 777 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 UCHL3P15374 230 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 ADRA2BP18089 450 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 GNGT1P63211 74 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 CFAP58Q5T655 872 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms