RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 VPS11Q9H270 941 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 KBTBD4Q9NVX7 518 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 GYPCP04921 128 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 TRADDQ15628 312 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 SLC4A8Q2Y0W8 1093 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 EPM2AIP1Q7L775 607 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-204ENST00000358025 GSTA5Q7RTV2 222 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 KRT12Q99456 494 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 CEP152O94986 1710 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 NAPAP54920 295 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 PPP2R5AQ15172 486 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 METTL16Q86W50 562 aaKnown RBP4.44□□□□□ -1.7
SYNE2-204ENST00000358025 PPP1R14CQ8TAE6 165 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 NSMCE1Q8WV22 266 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 DISC1Q9NRI5 854 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 ZSWIM5Q9P217 1185 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 BTBD18B2RXH4 712 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 VHLP40337 213 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 SURF1Q15526 300 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 ETAA1Q9NY74 926 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 FESP07332 822 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 HAND2P61296 217 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 ALKBH5Q6P6C2 394 aaKnown RBP4.44□□□□□ -1.7
SYNE2-204ENST00000358025 PRDM16Q9HAZ2 1276 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 TIMMDC1Q9NPL8 285 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 DNAJC12Q9UKB3 198 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 TRMT112Q9UI30 125 aaKnown RBP4.44□□□□□ -1.7
SYNE2-204ENST00000358025 CDC42BPBQ9Y5S2 1711 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 H3BNX3 289 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 PTPAQ15257 358 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 RARS2Q5T160 578 aaKnown RBP4.44□□□□□ -1.7
SYNE2-204ENST00000358025 CCDC134Q9H6E4 229 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 ATP8A1Q9Y2Q0 1164 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 SQORQ9Y6N5 450 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 USP6P35125 1406 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 TTC26A0AVF1 554 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 KCNK3O14649 394 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 SPOPO43791 374 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 EYA4O95677 639 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 RIN3Q8TB24 985 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 FAM81AQ8TBF8 368 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 LRRC42Q9Y546 428 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 HEXIM1O94992 359 aaKnown RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 ADCY8P40145 1251 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 RASA2Q15283 850 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 SHC4Q6S5L8 630 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 CYFIP1Q7L576 1253 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 BRIP1Q9BX63 1249 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 UBA5Q9GZZ9 404 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 ANAPC5Q9UJX4 755 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 GFAPP14136 432 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 STN1Q9H668 368 aaKnown RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 ESYT2A0FGR8 921 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 FAM26FQ5R3K3 315 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 PPP1R18Q6NYC8 613 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 RBBP8NLQ8NC74 664 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 FBXO2Q9UK22 296 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 ACTN1P12814 892 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 EHHADHQ08426 723 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 KNOP1Q1ED39 458 aaKnown RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 WLSQ5T9L3 541 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 ZHX3Q9H4I2 956 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 SPECC1L-ADORA2AF8WAN1 911 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 EXOC3O60645 756 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 CTSWP56202 376 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 TIMM10P62072 90 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 KLHL23Q8NBE8 558 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 KRT37O76014 449 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 IFNL3Q8IZI9 196 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 FUKQ8N0W3 1084 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 ENAHQ8N8S7 591 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 WDR60Q8WVS4 1066 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 PACSIN2Q9UNF0 486 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 CRB1P82279 1406 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 HNRNPRO43390 633 aaKnown RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 SSBP05455 408 aaKnown RBP eCLIP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 MPRIPQ6WCQ1 1025 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 PRR23CQ6ZRP0 262 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 DDX27Q96GQ7 796 aaKnown RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 ANKRD12Q6UB98 2062 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 TCEA3O75764 348 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 NQO1P15559 274 aaKnown RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 GCLCP48506 637 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF268Q14587 947 aaPredicted RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 JADE3Q92613 823 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 WWP1Q9H0M0 922 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 TMEM206Q9H813 350 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 NFU1Q9UMS0 254 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 BIRC5O15392 142 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 MYO1EQ12965 1108 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 SPIDRQ14159 915 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 PARP6Q2NL67 630 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 NVLO15381 856 aaKnown RBP4.43□□□□□ -1.7
SYNE2-204ENST00000358025 HLA-DOAP06340 250 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 PMS2P54278 862 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 SPATA5Q8NB90 893 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 GZMAP12544 262 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 HK2P52789 917 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF174Q15697 407 aa4.43□□□□□ -1.7
SYNE2-204ENST00000358025 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms