RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ITGB3BPQ13352 177 aaPredicted RBP19.4■□□□□ 0.7
RTN4-204ENST00000357732 PTGISQ16647 500 aa19.4■□□□□ 0.7
RTN4-204ENST00000357732 HERC4Q5GLZ8 1057 aaPredicted RBP19.4■□□□□ 0.7
RTN4-204ENST00000357732 MCTP2Q6DN12 878 aa19.4■□□□□ 0.7
RTN4-204ENST00000357732 TMC4Q7Z404 712 aa19.4■□□□□ 0.7
RTN4-204ENST00000357732 SLFN12Q8IYM2 578 aa19.4■□□□□ 0.7
RTN4-204ENST00000357732 CNPY4Q8N129 248 aa19.4■□□□□ 0.7
RTN4-204ENST00000357732 C8orf37Q96NL8 207 aa19.4■□□□□ 0.7
RTN4-204ENST00000357732 TMBIM4Q9HC24 238 aa19.4■□□□□ 0.7
RTN4-204ENST00000357732 CYP3A7-CYP3A51PA0A087WV96 503 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 GFPT2O94808 682 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 CYP11B2P19099 503 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 CYP3A7P24462 503 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 DRP2Q13474 957 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 RUFY4Q6ZNE9 571 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 IRF2BP2Q7Z5L9 587 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 LRRC57Q8N9N7 239 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 ATF5Q9Y2D1 282 aaPredicted RBP19.39■□□□□ 0.69
RTN4-204ENST00000357732 BTAF1O14981 1849 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 PGRMC1O00264 195 aaKnown RBP19.39■□□□□ 0.69
RTN4-204ENST00000357732 ZBTB5O15062 677 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 FAM107AO95990 144 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 NPEPPSP55786 919 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 VPS72Q15906 364 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 NAA35Q5VZE5 725 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 VPS36Q86VN1 386 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 GPBP1Q86WP2 473 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 ADGRF4Q8IZF3 695 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 SYCE1Q8N0S2 351 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 SH2D3CQ8N5H7 860 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 OTUD6BQ8N6M0 293 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 PRPF38AQ8NAV1 312 aaKnown RBP19.39■□□□□ 0.69
RTN4-204ENST00000357732 SLITRK6Q9H5Y7 841 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 KCNMB3Q9NPA1 279 aa19.39■□□□□ 0.69
RTN4-204ENST00000357732 ESYT3A0FGR9 886 aa19.38■□□□□ 0.69
RTN4-204ENST00000357732 AFPP02771 609 aaKnown RBP19.38■□□□□ 0.69
RTN4-204ENST00000357732 PLCB4Q15147 1175 aa19.38■□□□□ 0.69
RTN4-204ENST00000357732 TRAPPC3LQ5T215 181 aa19.38■□□□□ 0.69
RTN4-204ENST00000357732 KCTD16Q68DU8 428 aa19.38■□□□□ 0.69
RTN4-204ENST00000357732 KCTD17Q8N5Z5 321 aa19.38■□□□□ 0.69
RTN4-204ENST00000357732 MBOAT7Q96N66 472 aa19.38■□□□□ 0.69
RTN4-204ENST00000357732 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.38■□□□□ 0.697e-8■■□□□ 13.4
RTN4-204ENST00000357732 METTL14Q9HCE5 456 aaKnown RBP19.38■□□□□ 0.69
RTN4-204ENST00000357732 KIAA1024Q9UPX6 916 aa19.38■□□□□ 0.69
RTN4-204ENST00000357732 PLAAQ9Y263 795 aa19.38■□□□□ 0.69
RTN4-204ENST00000357732 ZSCAN5CA6NGD5 496 aaPredicted RBP19.37■□□□□ 0.69
RTN4-204ENST00000357732 GCOM1H8Y6P7 765 aaPredicted RBP19.37■□□□□ 0.69
RTN4-204ENST00000357732 KCNK3O14649 394 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 MYZAPP0CAP1 466 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 GUCY2FP51841 1108 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 PTK2Q05397 1052 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 SKIDA1Q1XH10 827 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 SPDYCQ5MJ68 293 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 RPGRQ92834 1020 aaKnown RBP19.37■□□□□ 0.69
RTN4-204ENST00000357732 SPAG5Q96R06 1193 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 PSTPIP2Q9H939 334 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 ARMCX3Q9UH62 379 aaPredicted RBP19.37■□□□□ 0.69
RTN4-204ENST00000357732 HDAC9Q9UKV0 1011 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 NENFQ9UMX5 172 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 ARFGEF1Q9Y6D6 1849 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 SLC16A3O15427 465 aaKnown RBP19.37■□□□□ 0.69
RTN4-204ENST00000357732 UCHL3P15374 230 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 NR2F2P24468 414 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 ATP1A2P50993 1020 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 MFSD14BQ5SR56 506 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 SLFN11Q7Z7L1 901 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 RASGEF1CQ8N431 466 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 NGLY1Q96IV0 654 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 NAGPAQ9UK23 515 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 SUGT1Q9Y2Z0 365 aa19.37■□□□□ 0.69
RTN4-204ENST00000357732 GTPBP10A4D1E9 387 aaKnown RBP19.36■□□□□ 0.69
RTN4-204ENST00000357732 PDXKO00764 312 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 TBX3O15119 743 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 CALUO43852 315 aaPredicted RBP19.36■□□□□ 0.69
RTN4-204ENST00000357732 SSBP05455 408 aaKnown RBP eCLIP19.36■□□□□ 0.69
RTN4-204ENST00000357732 ERCC3P19447 782 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 SLC12A3P55017 1021 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 PRR5LQ6MZQ0 368 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 DPY19L2P1Q6NXN4 242 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 MAATS1Q7Z4T9 603 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 NELFCDQ8IXH7 590 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 ZNF473Q8WTR7 871 aaKnown RBP19.36■□□□□ 0.69
RTN4-204ENST00000357732 PACSIN1Q9BY11 444 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 SUCLA2Q9P2R7 463 aaPredicted RBP19.36■□□□□ 0.69
RTN4-204ENST00000357732 E9PMD0 336 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 ECHS1P30084 290 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 UBE2SQ16763 222 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 EXOC3L4Q17RC7 722 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 CEP85LQ5SZL2 805 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 AGBL2Q5U5Z8 902 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 TTC19Q6DKK2 380 aaPredicted RBP19.36■□□□□ 0.69
RTN4-204ENST00000357732 ARMC9Q7Z3E5 817 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 NLRP14Q86W24 1093 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 FMNL3Q8IVF7 1028 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 ERMNQ8TAM6 284 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 GGA1Q9UJY5 639 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 DIS3Q9Y2L1 958 aaKnown RBP19.36■□□□□ 0.69
RTN4-204ENST00000357732 SAMM50Q9Y512 469 aa19.36■□□□□ 0.69
RTN4-204ENST00000357732 PPP1R11O60927 126 aaPredicted RBP19.35■□□□□ 0.69
RTN4-204ENST00000357732 KRT18P05783 430 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms