RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 NPEPPSP55786 919 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 DYDC1Q8WWB3 177 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 DDX41Q9UJV9 622 aaKnown RBP13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 PNMA3Q9UL41 463 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 ADM5C9JUS6 153 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 TRIM49P0CI25 452 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 TRIM49CP0CI26 452 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 ZNF394Q53GI3 561 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 PLA2G4FQ68DD2 849 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 ENGASEQ8NFI3 743 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 NLRP7Q8WX94 980 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 LPAR1Q92633 364 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 SAAL1Q96ER3 474 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 SALL1Q9NSC2 1324 aa13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 AFPP02771 609 aaKnown RBP13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 GAP43P17677 238 aa13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 CD58P19256 250 aa13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 CXCR5P32302 372 aa13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 GCLMP48507 274 aa13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 YARSP54577 528 aaKnown RBP13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 ACCSQ96QU6 501 aa13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 RGPD2P0DJD1 1756 aa13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 FOXP2O15409 715 aa13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 ILDR1Q86SU0 546 aaPredicted RBP13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 DAAM2Q86T65 1068 aa13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 VPS18Q9P253 973 aa13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 IFRD2Q12894 506 aaPredicted RBP13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 ANKRD40Q6AI12 368 aa13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 SLC35F6Q8N357 371 aa13.49□□□□□ -0.25
PCDHB11-201ENST00000354757 CTNND1O60716 968 aaKnown RBP13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 MYL1P05976 194 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 P4HBP07237 508 aaKnown RBP13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 MXI1P50539 228 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 SCARA5Q6ZMJ2 495 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 NKX2-3Q8TAU0 364 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 GOLGA5Q8TBA6 731 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 PPP1R13BQ96KQ4 1090 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 CCSER1Q9C0I3 900 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 PHLPP1O60346 1717 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 DENND3A2RUS2 1198 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 RPS12P25398 132 aaKnown RBP13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 PIK3CAP42336 1068 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 HUNKP57058 714 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 IQCB1Q15051 598 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 AP5M1Q9H0R1 490 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 FBXO40Q9UH90 709 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 EIF4A3P38919 411 aaKnown RBP13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 EHHADHQ08426 723 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 KIF22Q14807 665 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 LMBRD2Q68DH5 695 aaPredicted RBP13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 FAM163AQ96GL9 167 aaPredicted RBP13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 TSGA10Q9BZW7 698 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 UBE2TQ9NPD8 197 aaPredicted RBP13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 TBC1D22BQ9NU19 505 aa13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 PDS5AQ29RF7 1337 aaKnown RBP13.48□□□□□ -0.25
PCDHB11-201ENST00000354757 VPS41P49754 854 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 KCNK3O14649 394 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 NR3C1P04150 777 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 H2AFZP0C0S5 128 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 MAP2K1Q02750 393 aaPredicted RBP13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 RPS6KA1Q15418 735 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 ZC2HC1CQ53FD0 456 aaPredicted RBP13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 H2AFVQ71UI9 128 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 SCYL3Q8IZE3 742 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 MB21D1Q8N884 522 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 ZNF384Q8TF68 577 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 CCDC51Q96ER9 411 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 MMP19Q99542 508 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 ACTN4O43707 911 aaKnown RBP13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 CELF2O95319 508 aaKnown RBP13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 GGPS1O95749 300 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 PGK2P07205 417 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 VCAM1P19320 739 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 MCM3P25205 808 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 HNRNPH2P55795 449 aaKnown RBP13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 PPP1R7Q15435 360 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 C8orf74Q6P047 294 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 MAP3K14Q99558 947 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 KCNH7Q9NS40 1196 aa13.47□□□□□ -0.25
PCDHB11-201ENST00000354757 OAS2P29728 719 aaKnown RBP13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 PRPHP41219 470 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 MRPS25P82663 173 aaKnown RBP13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 KRT76Q01546 638 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 LRRC63Q05C16 580 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 MTF1Q14872 753 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 SPDYE2Q495Y8 402 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 MOB2Q70IA6 237 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 TAB3Q8N5C8 712 aaPredicted RBP13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 NLGN2Q8NFZ4 835 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 MRRFQ96E11 262 aaKnown RBP13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 PARP2Q9UGN5 583 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 PCDHA10Q9Y5I2 948 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 USP27XA6NNY8 438 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 HIP1RO75146 1068 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 PPP2R5AQ15172 486 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 RHPN2Q8IUC4 686 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 TMEM143Q96AN5 459 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 SPATA33Q96N06 139 aa13.46□□□□□ -0.25
PCDHB11-201ENST00000354757 NT5C1BQ96P26 610 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms