RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 RCCD1A6NED2 376 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 PPP1R12BO60237 982 aaPredicted RBP9.52□□□□□ -0.89
TRIM55-204ENST00000353317 SYF2O95926 243 aaKnown RBP9.52□□□□□ -0.89
TRIM55-204ENST00000353317 CYP3A7P24462 503 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 DSG3P32926 999 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 STAT3P40763 770 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 MOGSQ13724 837 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 PRR16Q569H4 304 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 SH3D19Q5HYK7 790 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 PAPD7Q5XG87 772 aaKnown RBP9.52□□□□□ -0.89
TRIM55-204ENST00000353317 KCNK18Q7Z418 384 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 LACRTQ9GZZ8 138 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 FAM204AQ9H8W3 233 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 KCNMB3Q9NPA1 279 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 MED4Q9NPJ6 270 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 ZC3H4Q9UPT8 1303 aaKnown RBP9.51□□□□□ -0.89
TRIM55-204ENST00000353317 SPDYE16A6NNV3 312 aaPredicted RBP9.51□□□□□ -0.89
TRIM55-204ENST00000353317 C19orf81C9J6K1 198 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 KLRC4O43908 158 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 RPS6KA5O75582 802 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 EEF1GP26641 437 aaKnown RBP9.51□□□□□ -0.89
TRIM55-204ENST00000353317 USP11P51784 963 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 AP3B2Q13367 1082 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 MEA1Q16626 185 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 ETNPPLQ8TBG4 499 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 CAPZA3Q96KX2 299 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 PNMA5Q96PV4 448 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 CLEC11AQ9Y240 323 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 RRP15Q9Y3B9 282 aaKnown RBP9.51□□□□□ -0.89
TRIM55-204ENST00000353317 KIAA1217Q5T5P2 1943 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 LOC285556D6RIA3 1793 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 RBBP6Q7Z6E9 1792 aaKnown RBP9.51□□□□□ -0.89
TRIM55-204ENST00000353317 RASSF10A6NK89 507 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 SPDYE3A6NKU9 549 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 B4DLN1 442 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 GCOM1H8Y6P7 765 aaPredicted RBP9.51□□□□□ -0.89
TRIM55-204ENST00000353317 LAD1O00515 517 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 RNF40O75150 1001 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 ZMYND10O75800 440 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 IVLP07476 585 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 POLR2MP0CAP2 368 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 PLCG1P19174 1290 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 KLK7P49862 253 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 HSD17B4P51659 736 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 SPIRE1Q08AE8 756 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 GRB10Q13322 594 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 MAPK8IP2Q13387 824 aaPredicted RBP9.51□□□□□ -0.89
TRIM55-204ENST00000353317 GDAP1L1Q96MZ0 367 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 TTYH3Q9C0H2 523 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 CCSER1Q9C0I3 900 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 RASSF4Q9H2L5 321 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 VIPAS39Q9H9C1 493 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 ZNF408Q9H9D4 720 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 NMRK2Q9NPI5 230 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 DUSP10Q9Y6W6 482 aa9.51□□□□□ -0.89
TRIM55-204ENST00000353317 DOCK5Q9H7D0 1870 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 ZNF185O15231 689 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 MSH4O15457 936 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 PRPF6O94906 941 aaKnown RBP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 AARSP49588 968 aaKnown RBP eCLIP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 FXR2P51116 673 aaKnown RBP eCLIP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 TTLL12Q14166 644 aaPredicted RBP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 KCNB1Q14721 858 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 COG2Q14746 738 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 TTI2Q6NXR4 508 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 GIMAP8Q8ND71 665 aaPredicted RBP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 ZNF526Q8TF50 670 aaPredicted RBP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 RIN2Q8WYP3 895 aaPredicted RBP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 JAKMIP2Q96AA8 810 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 TRIM47Q96LD4 638 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 TAAR1Q96RJ0 339 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 THAP9Q9H5L6 903 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 BLOC1S4Q9NUP1 217 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 HPCAL4Q9UM19 191 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 MRPL11Q9Y3B7 192 aaKnown RBP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 ABCB11O95342 1321 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 IQCA1LA6NCM1 817 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 PDE2AO00408 941 aaPredicted RBP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 KRT86O43790 486 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 RHOBTB3O94955 611 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 MYBL2P10244 700 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 TRIM21P19474 475 aaKnown RBP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 CIITAP33076 1130 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 IREB2P48200 963 aaKnown RBP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 DNM2P50570 870 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 RPS6P62753 249 aaKnown RBP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 KRT83P78385 493 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 TSR1Q2NL82 804 aaKnown RBP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 LDLRAD1Q5T700 205 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 LRRC31Q6UY01 552 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 ZNF662Q6ZS27 426 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 KIAA1328Q86T90 577 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 CABP7Q86V35 215 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 ANKRD13AQ8IZ07 590 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 RASSF8Q8NHQ8 419 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 SYTL5Q8TDW5 730 aaPredicted RBP9.5□□□□□ -0.89
TRIM55-204ENST00000353317 TUBGCP2Q9BSJ2 902 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 GLT8D2Q9H1C3 349 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 ACBD3Q9H3P7 528 aa9.5□□□□□ -0.89
TRIM55-204ENST00000353317 NHEJ1Q9H9Q4 299 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms