RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 GOLGA8IPA6NC78 632 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 GOLGA8JA6NMD2 632 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 ZBED4O75132 1171 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 ACTN1P12814 892 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 NMT1P30419 496 aaKnown RBP11.43□□□□□ -0.58
SMPD4-201ENST00000351288 GMPSP49915 693 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-201ENST00000351288 AMPD2Q01433 879 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 VWA3BQ502W6 1294 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 TTC19Q6DKK2 380 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-201ENST00000351288 STYK1Q6J9G0 422 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 SLFN12Q8IYM2 578 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 DAGLBQ8NCG7 672 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 DCAF4Q8WV16 495 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 C7orf25Q9BPX7 421 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-201ENST00000351288 ARMCX3Q9UH62 379 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-201ENST00000351288 ASTN2O75129 1339 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-201ENST00000351288 BTAF1O14981 1849 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 COL5A3P25940 1745 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-201ENST00000351288 LRRN2O75325 713 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 KIF11P52732 1056 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 TNFAIP1Q13829 316 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 TRIM14Q14142 442 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 GADL1Q6ZQY3 521 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 SCLT1Q96NL6 688 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 MTMR9Q96QG7 549 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 P2RX7Q99572 595 aaKnown RBP11.43□□□□□ -0.58
SMPD4-201ENST00000351288 HAUS4Q9H6D7 363 aa11.43□□□□□ -0.58
SMPD4-201ENST00000351288 MED24O75448 989 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 CASP5P51878 434 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 KRT83P78385 493 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 JAG1P78504 1218 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 KLHL30Q0D2K2 578 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 ZC2HC1CQ53FD0 456 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-201ENST00000351288 ANGEL2Q5VTE6 544 aaKnown RBP11.42□□□□□ -0.58
SMPD4-201ENST00000351288 FAM133AQ8N9E0 248 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 GLT8D2Q9H1C3 349 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 LUC7LQ9NQ29 371 aaKnown RBP11.42□□□□□ -0.58
SMPD4-201ENST00000351288 NYAP2Q9P242 653 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 NRAPQ86VF7 1730 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 ESYT3A0FGR9 886 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 K7ENM7 598 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 EGFRP00533 1210 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 EPB41P11171 864 aaKnown RBP11.42□□□□□ -0.58
SMPD4-201ENST00000351288 ZBED6P86452 979 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 FKBP3Q00688 224 aaKnown RBP11.42□□□□□ -0.58
SMPD4-201ENST00000351288 NBPF12Q5TAG4 269 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-201ENST00000351288 FOXR1Q6PIV2 292 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 UNC13DQ70J99 1090 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 TAF4BQ92750 862 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 SECISBP2LQ93073 1101 aaKnown RBP11.42□□□□□ -0.58
SMPD4-201ENST00000351288 TTYH3Q9C0H2 523 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 MYOZ2Q9NPC6 264 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 TMOD4Q9NZQ9 345 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 STK17AQ9UEE5 414 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 WNK3Q9BYP7 1800 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 TMEM150BA6NC51 233 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 WNT10BO00744 389 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 ONECUT3O60422 494 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-201ENST00000351288 PEX10O60683 326 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 FTCDO95954 541 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 FOSP01100 380 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-201ENST00000351288 XRCC5P13010 732 aaKnown RBP11.42□□□□□ -0.58
SMPD4-201ENST00000351288 PRPHP41219 470 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 TRAPPC11Q7Z392 1133 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 ANKRD35Q8N283 1001 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 KDM3AQ9Y4C1 1321 aa11.42□□□□□ -0.58
SMPD4-201ENST00000351288 AHDC1Q5TGY3 1603 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-201ENST00000351288 ZSCAN5CA6NGD5 496 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-201ENST00000351288 GCFC2P16383 781 aaKnown RBP11.41□□□□□ -0.58
SMPD4-201ENST00000351288 CYP2C19P33261 490 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 KCNA1Q09470 495 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 SEPT14Q6ZU15 432 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 HDXQ7Z353 690 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 ADAT2Q7Z6V5 191 aaKnown RBP11.41□□□□□ -0.58
SMPD4-201ENST00000351288 PPP1R16BQ96T49 567 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 RMDN3Q96TC7 470 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 PACSIN1Q9BY11 444 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 DEFB129Q9H1M3 183 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 ADAMTS1Q9UHI8 967 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 L1RE1Q9UN81 338 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 PCDHA13Q9Y5I0 950 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 FAM86B1E9PN63 330 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 NFIBO00712 420 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 FAM86B2P0C5J1 330 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 KRT13P13646 458 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 NCAPG2Q86XI2 1143 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 CATSPER3Q86XQ3 398 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 EIF2AK1Q9BQI3 630 aaKnown RBP11.41□□□□□ -0.58
SMPD4-201ENST00000351288 DMGDHQ9UI17 866 aaKnown RBP11.41□□□□□ -0.58
SMPD4-201ENST00000351288 MYH1P12882 1939 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 ROBO3Q96MS0 1386 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 A0A1W2PQC6 194 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 IPO5O00410 1097 aaKnown RBP11.41□□□□□ -0.58
SMPD4-201ENST00000351288 TACC1O75410 805 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 ERLIN1O75477 346 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 GJC1P36383 396 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 PAFAH1B1P43034 410 aa11.41□□□□□ -0.58
SMPD4-201ENST00000351288 HLTFQ14527 1009 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMPD4-201ENST00000351288 WHAMMP3Q1A5X7 153 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms