RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 CHMP4BP1P59074 171 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 AP3B2Q13367 1082 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 COG2Q14746 738 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 MAN2A1Q16706 1144 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 ETNPPLQ8TBG4 499 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 NAPGQ99747 312 aaPredicted RBP15.32■□□□□ 0.04
TRIM4-201ENST00000349062 SEPT11Q9NVA2 429 aaKnown RBP15.32■□□□□ 0.04
TRIM4-201ENST00000349062 CAPN11Q9UMQ6 739 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 MYO3BQ8WXR4 1341 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 CNTNAP1P78357 1384 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 SASH3O75995 380 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 ZSCAN26Q16670 478 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 ELMO3Q96BJ8 720 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 WNK4Q96J92 1243 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 FGFR1OPO95684 399 aaKnown RBP15.32■□□□□ 0.04
TRIM4-201ENST00000349062 ASNSP08243 561 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 HERVK_113P62684 666 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 FAM133AQ8N9E0 248 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 LENG9Q96B70 501 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 LRRC27Q9C0I9 530 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 DEFB129Q9H1M3 183 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 VPS18Q9P253 973 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 HACL1Q9UJ83 578 aa15.32■□□□□ 0.04
TRIM4-201ENST00000349062 TMCO5BA8MYB1 307 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 CETN3O15182 167 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 FOSP01100 380 aaPredicted RBP15.31■□□□□ 0.04
TRIM4-201ENST00000349062 SREBF1P36956 1147 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 TRIM14Q14142 442 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 GJB7Q6PEY0 223 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 IFIH1Q9BYX4 1025 aaKnown RBP15.31■□□□□ 0.04
TRIM4-201ENST00000349062 GLT8D2Q9H1C3 349 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 MOCS3O95396 460 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 ATP1A1P05023 1023 aaKnown RBP15.31■□□□□ 0.04
TRIM4-201ENST00000349062 KCNJ6P48051 423 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 KIF5AQ12840 1032 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 GIT2Q14161 759 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 MUM1L1Q5H9M0 696 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 CCDC51Q96ER9 411 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 SPAG5Q96R06 1193 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 WRNIP1Q96S55 665 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 PARD6BQ9BYG5 372 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 RSPH14Q9UHP6 348 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 MRPL11Q9Y3B7 192 aaKnown RBP15.31■□□□□ 0.04
TRIM4-201ENST00000349062 MRFAP1Q9Y605 127 aa15.31■□□□□ 0.04
TRIM4-201ENST00000349062 CENPFP49454 3210 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 IPO5O00410 1097 aaKnown RBP15.3■□□□□ 0.04
TRIM4-201ENST00000349062 USO1O60763 962 aaKnown RBP15.3■□□□□ 0.04
TRIM4-201ENST00000349062 TADA3O75528 432 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 HMGCS2P54868 508 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 ZBED6P86452 979 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 ITIH6Q6UXX5 1313 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 TISP43B9A030 160 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 NCK2O43639 380 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 SLC9A1P19634 815 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 CEP55Q53EZ4 464 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 ODR4Q5SWX8 454 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 MRIQ9BWK5 157 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 SUGCTQ9HAC7 445 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 EHD2Q9NZN4 543 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 COL20A1Q9P218 1284 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 ZHX2Q9Y6X8 837 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 ARHGAP25P42331 645 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 MAP3K9P80192 1104 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 ANGEL2Q5VTE6 544 aaKnown RBP15.3■□□□□ 0.04
TRIM4-201ENST00000349062 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 CCDC102AQ96A19 550 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 GMLQ99445 158 aa15.3■□□□□ 0.04
TRIM4-201ENST00000349062 ARHGEF35A5YM69 484 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 SLC12A3P55017 1021 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 LRRC55Q6ZSA7 311 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 TXLNBQ8N3L3 684 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 TAAR1Q96RJ0 339 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 UNC45AQ9H3U1 944 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 WRAP73Q9P2S5 460 aaPredicted RBP15.29■□□□□ 0.04
TRIM4-201ENST00000349062 RBAK-RBAKDNI3L0D1 243 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 RPA1P27694 616 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 MAGEA1P43355 309 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 KIF11P52732 1056 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 KCNH2Q12809 1159 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 GOLGA1Q92805 767 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 LXNQ9BS40 222 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 GOLPH3Q9H4A6 298 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 RPAP3Q9H6T3 665 aaPredicted RBP15.29■□□□□ 0.04
TRIM4-201ENST00000349062 ARHGAP20Q9P2F6 1191 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 ARMCX3Q9UH62 379 aaPredicted RBP15.29■□□□□ 0.04
TRIM4-201ENST00000349062 ADAMTS1Q9UHI8 967 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 LCMT1Q9UIC8 334 aa15.29■□□□□ 0.04
TRIM4-201ENST00000349062 KRT86O43790 486 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 TRIM49P0CI25 452 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 TRIM49CP0CI26 452 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 SOX10P56693 466 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 LRRC63Q05C16 580 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 CC2D1AQ6P1N0 951 aaPredicted RBP15.28■□□□□ 0.04
TRIM4-201ENST00000349062 MIER3Q7Z3K6 550 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 ATG4CQ96DT6 458 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 FEZ2Q9UHY8 353 aaPredicted RBP15.28■□□□□ 0.04
TRIM4-201ENST00000349062 EFCAB8A8MWE9 144 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 NFKBIEO00221 500 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 USP8P40818 1118 aa15.28■□□□□ 0.04
TRIM4-201ENST00000349062 SPIRE1Q08AE8 756 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms