RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 GRM4Q14833 912 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 KRT71Q3SY84 523 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 CCDC38Q502W7 563 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 HGSNATQ68CP4 663 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 CWF19L1Q69YN2 538 aaKnown RBP11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 SLC30A9Q6PML9 568 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 RRAGAQ7L523 313 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 ACTRT1Q8TDG2 376 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 ATXN2LQ8WWM7 1075 aaKnown RBP11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 SEC14L1Q92503 715 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 SYN2Q92777 582 aaPredicted RBP11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 PBKQ96KB5 322 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 NUCKS1Q9H1E3 243 aaKnown RBP11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 NEUROG2Q9H2A3 272 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 CCDC87Q9NVE4 849 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 SAMD15Q9P1V8 674 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 WNK3Q9BYP7 1800 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 BTNL10A8MVZ5 291 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 SNAP23O00161 211 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 STXBP3O00186 592 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 WFS1O76024 890 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 ADAMTS2O95450 1211 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 ALDH5A1P51649 535 aaPredicted RBP11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 SF3B3Q15393 1217 aaKnown RBP11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 MAN2A1Q16706 1144 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 KRT25Q7Z3Z0 450 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 HOOK3Q86VS8 718 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 TRIM9Q9C026 710 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 YIPF3Q9GZM5 350 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 NSRP1Q9H0G5 558 aaKnown RBP11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 DCP1AQ9NPI6 582 aaPredicted RBP11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 FAM207AQ9NSI2 230 aaPredicted RBP11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 AGAP1Q9UPQ3 857 aa11.27□□□□□ -0.61
CHRNA1-202ENST00000348749 ROBO3Q96MS0 1386 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 COL14A1Q05707 1796 aaKnown RBP11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 PVALEFA0A1B0GWK0 134 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 CCDC188H7C350 402 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 CAMTA2O94983 1202 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 MMEP08473 750 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 RARAP10276 462 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 ABL2P42684 1182 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 MMP13P45452 471 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 DYNLL1P63167 89 aaKnown RBP11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 ROR2Q01974 943 aaKnown RBP11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 LMNB2Q03252 620 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 GALNTL6Q49A17 601 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 ANKRD20A2Q5SQ80 823 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 THEMIS2Q5TEJ8 643 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 ANKRD20A1Q5TYW2 823 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 ANKRD20A3Q5VUR7 823 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 CENPPQ6IPU0 288 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 SAMD1Q6SPF0 538 aaPredicted RBP11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 FAM43BQ6ZT52 329 aaPredicted RBP11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 FBXO33Q7Z6M2 555 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 CABP7Q86V35 215 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 GBP7Q8N8V2 638 aaPredicted RBP11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 ZFAND2BQ8WV99 257 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 TAF4BQ92750 862 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 NSUN4Q96CB9 384 aaKnown RBP11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 LRRC27Q9C0I9 530 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 MMRN2Q9H8L6 949 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 BARHL2Q9NY43 387 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 PCDHA6Q9UN73 950 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 ZNF652Q9Y2D9 606 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 PCDHA8Q9Y5H6 950 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 FLT1P17948 1338 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 FAM205AQ6ZU69 1335 aa11.26□□□□□ -0.61
CHRNA1-202ENST00000348749 TSPY2A6NKD2 308 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 PPFIA2O75334 1257 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 RTN3O95197 1032 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 OAS1P00973 400 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 SERPING1P05155 500 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 CHN1P15882 459 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 ATP2A2P16615 1042 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 ATP4AP20648 1035 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 KLRC1P26715 233 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 SMARCA1P28370 1054 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 FLT3P36888 993 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 GCLCP48506 637 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 PAPOLAP51003 745 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 KCNJ2P63252 427 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 LRRC63Q05C16 580 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 EHHADHQ08426 723 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 PDE4DQ08499 809 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 SLC9C1Q4G0N8 1177 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 CMPK2Q5EBM0 449 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 NBPF5PQ86XG9 351 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 DDX42Q86XP3 938 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 DRAXINQ8NBI3 349 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 MDM1Q8TC05 714 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 PGM2Q96G03 612 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 TXLNGYQ9BZA5 131 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 SLITRK6Q9H5Y7 841 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 FAM114A2Q9NRY5 505 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 STK17AQ9UEE5 414 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 RGS17Q9UGC6 210 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 PNMA2Q9UL42 364 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 CYP2D7A0A087X1C5 515 aa11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 MPHOSPH10O00566 681 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-202ENST00000348749 NKRFO15226 690 aaKnown RBP eCLIP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms