RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 MCF2LO15068 1137 aa18.81■□□□□ 0.6
SPAST-202ENST00000345662 H2AFXP16104 143 aaPredicted RBP18.81■□□□□ 0.6
SPAST-202ENST00000345662 CHRNDQ07001 517 aa18.81■□□□□ 0.6
SPAST-202ENST00000345662 PDIK1LQ8N165 341 aa18.81■□□□□ 0.6
SPAST-202ENST00000345662 PROM2Q8N271 834 aa18.81■□□□□ 0.6
SPAST-202ENST00000345662 POMGNT1Q8WZA1 660 aa18.81■□□□□ 0.6
SPAST-202ENST00000345662 NCF2P19878 526 aaPredicted RBP18.81■□□□□ 0.6
SPAST-202ENST00000345662 PIK3CAP42336 1068 aa18.81■□□□□ 0.6
SPAST-202ENST00000345662 BBS9Q3SYG4 887 aa18.81■□□□□ 0.6
SPAST-202ENST00000345662 SLC30A9Q6PML9 568 aa18.81■□□□□ 0.6
SPAST-202ENST00000345662 MLXIPLQ9NP71 852 aa18.81■□□□□ 0.6
SPAST-202ENST00000345662 GNPATO15228 680 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 ECE1P42892 770 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 STX1BP61266 288 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 CAV1Q03135 178 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 MKRN3Q13064 507 aaKnown RBP18.8■□□□□ 0.6
SPAST-202ENST00000345662 PDCD2Q16342 344 aaPredicted RBP18.8■□□□□ 0.6
SPAST-202ENST00000345662 PDZD4Q76G19 769 aaPredicted RBP18.8■□□□□ 0.6
SPAST-202ENST00000345662 METTL16Q86W50 562 aaKnown RBP18.8■□□□□ 0.6
SPAST-202ENST00000345662 CRLF3Q8IUI8 442 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 CHURC1Q8WUH1 139 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 NSMCE1Q8WV22 266 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 FHOD1Q9Y613 1164 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 NCOA3Q9Y6Q9 1424 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 PLA2G4BP0C869 781 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 POLR2MP0CAP2 368 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 MDM2Q00987 491 aaPredicted RBP18.8■□□□□ 0.6
SPAST-202ENST00000345662 ASPRV1Q53RT3 343 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 CCDC138Q96M89 665 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.8■□□□□ 0.6
SPAST-202ENST00000345662 PCDHB4Q9Y5E5 795 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 CEP170Q5SW79 1584 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 BCORL1Q5H9F3 1711 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 RFX7Q2KHR2 1363 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 FOXN1O15353 648 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 ACTN1P12814 892 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 FAM187AA6NFU0 413 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 DIAPH2O60879 1101 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 LSP1P33241 339 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 ART3Q13508 389 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 C1orf146Q5VVC0 180 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 RSBN1LQ6PCB5 846 aaPredicted RBP18.8■□□□□ 0.6
SPAST-202ENST00000345662 KRT26Q7Z3Y9 468 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 SAYSD1Q9NPB0 183 aa18.8■□□□□ 0.6
SPAST-202ENST00000345662 STXBP3O00186 592 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 CNGA1P29973 690 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 HIPK4Q8NE63 616 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 STAMBPL1Q96FJ0 436 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 IRAK4Q9NWZ3 460 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 BAG5Q9UL15 447 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 AP2B1P63010 937 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 FAM83BQ5T0W9 1011 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 SLC17A8Q8NDX2 589 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 NRBF2Q96F24 287 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 TMOD4Q9NZQ9 345 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 MLH3Q9UHC1 1453 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 TNNC2P02585 160 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 TCP10Q12799 353 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 BYSLQ13895 437 aaKnown RBP18.79■□□□□ 0.6
SPAST-202ENST00000345662 RNF207Q6ZRF8 634 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 TC2NQ8N9U0 490 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 LRIG3Q6UXM1 1119 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 WDR75Q8IWA0 830 aaKnown RBP18.79■□□□□ 0.6
SPAST-202ENST00000345662 TTC17Q96AE7 1141 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 SEPT10Q9P0V9 454 aa18.79■□□□□ 0.6
SPAST-202ENST00000345662 THRAP3Q9Y2W1 955 aaKnown RBP18.79■□□□□ 0.6
SPAST-202ENST00000345662 REREQ9P2R6 1566 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 ENO4A6NNW6 628 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 NOP56O00567 594 aaKnown RBP18.78■□□□□ 0.6
SPAST-202ENST00000345662 EEF1DP29692 281 aaKnown RBP18.78■□□□□ 0.6
SPAST-202ENST00000345662 LRRC14Q15048 493 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 ACCSQ96QU6 501 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 CSRNP1Q96S65 589 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 TRIM56Q9BRZ2 755 aaKnown RBP18.78■□□□□ 0.6
SPAST-202ENST00000345662 GEMIN8Q9NWZ8 242 aaKnown RBP18.78■□□□□ 0.6
SPAST-202ENST00000345662 ATP10DQ9P241 1426 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 ZNF185O15231 689 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 CFLARO15519 480 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 EEF1B2P24534 225 aaKnown RBP18.78■□□□□ 0.6
SPAST-202ENST00000345662 CHRNA3P32297 505 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 PLCB4Q15147 1175 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 GPATCH4Q5T3I0 446 aaKnown RBP18.78■□□□□ 0.6
SPAST-202ENST00000345662 RAPH1Q70E73 1250 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 GINM1Q9NU53 330 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 NDE1Q9NXR1 346 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 TMPRSS15P98073 1019 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 GRAMD4Q6IC98 578 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 MB21D2Q8IYB1 491 aaPredicted RBP18.78■□□□□ 0.6
SPAST-202ENST00000345662 DTNBP1Q96EV8 351 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 CALR3Q96L12 384 aaKnown RBP18.78■□□□□ 0.6
SPAST-202ENST00000345662 CCDC68Q9H2F9 335 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 TMEM206Q9H813 350 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 LIMA1Q9UHB6 759 aaKnown RBP18.78■□□□□ 0.6
SPAST-202ENST00000345662 NOC2LQ9Y3T9 749 aaKnown RBP18.78■□□□□ 0.6
SPAST-202ENST00000345662 ZBED4O75132 1171 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 PPM1FP49593 454 aaPredicted RBP18.78■□□□□ 0.6
SPAST-202ENST00000345662 MFSD14BQ5SR56 506 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 FUT8Q9BYC5 575 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 SMYD2Q9NRG4 433 aa18.78■□□□□ 0.6
SPAST-202ENST00000345662 USP40Q9NVE5 1235 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms