RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 TMCO5BA8MYB1 307 aa19.47■□□□□ 0.71
VHL-202ENST00000345392 MAGOHP61326 146 aaKnown RBP19.47■□□□□ 0.71
VHL-202ENST00000345392 MAGOHBQ96A72 148 aaKnown RBP19.47■□□□□ 0.71
VHL-202ENST00000345392 LRRC45Q96CN5 670 aa19.47■□□□□ 0.71
VHL-202ENST00000345392 SCLT1Q96NL6 688 aa19.47■□□□□ 0.71
VHL-202ENST00000345392 WNK3Q9BYP7 1800 aa19.47■□□□□ 0.71
VHL-202ENST00000345392 GNPATO15228 680 aa19.47■□□□□ 0.71
VHL-202ENST00000345392 PPP2R2AP63151 447 aa19.47■□□□□ 0.71
VHL-202ENST00000345392 CUL1Q13616 776 aa19.47■□□□□ 0.71
VHL-202ENST00000345392 TMEM266Q2M3C6 531 aa19.47■□□□□ 0.71
VHL-202ENST00000345392 ANKRD20A8PQ5CZ79 823 aa19.47■□□□□ 0.71
VHL-202ENST00000345392 KRT79Q5XKE5 535 aa19.47■□□□□ 0.71
VHL-202ENST00000345392 FAM228AQ86W67 206 aa19.47■□□□□ 0.71
VHL-202ENST00000345392 PARP9Q8IXQ6 854 aa19.47■□□□□ 0.71
VHL-202ENST00000345392 SEC63Q9UGP8 760 aaKnown RBP19.47■□□□□ 0.71
VHL-202ENST00000345392 SUFUQ9UMX1 484 aa19.47■□□□□ 0.71
VHL-202ENST00000345392 EDIL3O43854 480 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 BYSLQ13895 437 aaKnown RBP19.46■□□□□ 0.71
VHL-202ENST00000345392 NEDD9Q14511 834 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 PREPLQ4J6C6 727 aaPredicted RBP19.46■□□□□ 0.71
VHL-202ENST00000345392 PROM2Q8N271 834 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 COA7Q96BR5 231 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 DNAJC19Q96DA6 116 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 SPZ1Q9BXG8 430 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 CELF4Q9BZC1 486 aaKnown RBP19.46■□□□□ 0.71
VHL-202ENST00000345392 OPLAHO14841 1288 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 USP11P51784 963 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 DRP2Q13474 957 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 ZNF571Q7Z3V5 609 aaPredicted RBP19.46■□□□□ 0.71
VHL-202ENST00000345392 METTL13Q8N6R0 699 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 MDM1Q8TC05 714 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 PANK4Q9NVE7 773 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 AIPL1Q9NZN9 384 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 MCM8Q9UJA3 840 aa19.46■□□□□ 0.71
VHL-202ENST00000345392 NOC2LQ9Y3T9 749 aaKnown RBP19.46■□□□□ 0.71
VHL-202ENST00000345392 FAM170AA1A519 330 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 SRRM3A6NNA2 597 aaPredicted RBP19.45■□□□□ 0.7
VHL-202ENST00000345392 KRIT1O00522 736 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 EPS15P42566 896 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 FXR2P51116 673 aaKnown RBP eCLIP19.45■□□□□ 0.7
VHL-202ENST00000345392 SNCBQ16143 134 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 FAM26FQ5R3K3 315 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 POTEAQ6S8J7 498 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 RUFY4Q6ZNE9 571 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 DPH5Q9H2P9 285 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 ACTR5Q9H9F9 607 aaPredicted RBP19.45■□□□□ 0.7
VHL-202ENST00000345392 NPHP3-ACAD11A0A0J9YXS1 232 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 RASA1P20936 1047 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 SCTRP47872 440 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 PSMD2Q13200 908 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 BIRC3Q13489 604 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 E2F5Q15329 346 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 KRT71Q3SY84 523 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 TRIM59Q8IWR1 403 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 CACNA2D3Q8IZS8 1091 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 TRIM31Q9BZY9 425 aa19.45■□□□□ 0.7
VHL-202ENST00000345392 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.45■□□□□ 0.7
VHL-202ENST00000345392 MYH4Q9Y623 1939 aa19.44■□□□□ 0.7
VHL-202ENST00000345392 TTI1O43156 1089 aa19.44■□□□□ 0.7
VHL-202ENST00000345392 CPLX4Q7Z7G2 160 aa19.44■□□□□ 0.7
VHL-202ENST00000345392 N4BP2L2Q92802 583 aaPredicted RBP19.44■□□□□ 0.7
VHL-202ENST00000345392 LZTS2Q9BRK4 669 aa19.44■□□□□ 0.7
VHL-202ENST00000345392 GANQ9H2C0 597 aa19.44■□□□□ 0.7
VHL-202ENST00000345392 ODF2LQ9ULJ1 636 aa19.44■□□□□ 0.7
VHL-202ENST00000345392 PGRMC1O00264 195 aaKnown RBP19.44■□□□□ 0.7
VHL-202ENST00000345392 SLC9A1P19634 815 aa19.44■□□□□ 0.7
VHL-202ENST00000345392 TM4SF1P30408 202 aa19.44■□□□□ 0.7
VHL-202ENST00000345392 SLC10A5Q5PT55 438 aa19.44■□□□□ 0.7
VHL-202ENST00000345392 ACTRT1Q8TDG2 376 aa19.44■□□□□ 0.7
VHL-202ENST00000345392 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.44■□□□□ 0.7
VHL-202ENST00000345392 PBKQ96KB5 322 aa19.44■□□□□ 0.7
VHL-202ENST00000345392 CDCA7Q9BWT1 371 aaPredicted RBP19.44■□□□□ 0.7
VHL-202ENST00000345392 ANKRD2Q9GZV1 360 aa19.44■□□□□ 0.7
VHL-202ENST00000345392 TPX2Q9ULW0 747 aaKnown RBP19.44■□□□□ 0.7
VHL-202ENST00000345392 NF2P35240 595 aa19.43■□□□□ 0.7
VHL-202ENST00000345392 DHX9Q08211 1270 aaKnown RBP19.43■□□□□ 0.7
VHL-202ENST00000345392 KCNH2Q12809 1159 aa19.43■□□□□ 0.7
VHL-202ENST00000345392 ARHGAP27Q6ZUM4 889 aa19.43■□□□□ 0.7
VHL-202ENST00000345392 CLEC10AQ8IUN9 316 aa19.43■□□□□ 0.7
VHL-202ENST00000345392 LRRC57Q8N9N7 239 aa19.43■□□□□ 0.7
VHL-202ENST00000345392 DONSONQ9NYP3 566 aa19.43■□□□□ 0.7
VHL-202ENST00000345392 FRMPD2Q68DX3 1309 aaPredicted RBP19.43■□□□□ 0.7
VHL-202ENST00000345392 ELF1P32519 619 aa19.43■□□□□ 0.7
VHL-202ENST00000345392 EIF6P56537 245 aaKnown RBP19.43■□□□□ 0.7
VHL-202ENST00000345392 ADAM9Q13443 819 aa19.43■□□□□ 0.7
VHL-202ENST00000345392 IRF2BP2Q7Z5L9 587 aa19.43■□□□□ 0.7
VHL-202ENST00000345392 SGSM3Q96HU1 749 aa19.43■□□□□ 0.7
VHL-202ENST00000345392 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.43■□□□□ 0.7
VHL-202ENST00000345392 CEP83Q9Y592 693 aa19.43■□□□□ 0.7
VHL-202ENST00000345392 SCP2P22307 547 aa19.42■□□□□ 0.7
VHL-202ENST00000345392 PSEN1P49768 467 aa19.42■□□□□ 0.7
VHL-202ENST00000345392 WLSQ5T9L3 541 aa19.42■□□□□ 0.7
VHL-202ENST00000345392 TMC3Q7Z5M5 1100 aa19.42■□□□□ 0.7
VHL-202ENST00000345392 TEX2Q8IWB9 1127 aa19.42■□□□□ 0.7
VHL-202ENST00000345392 TATDN2Q93075 761 aa19.42■□□□□ 0.7
VHL-202ENST00000345392 SPAG5Q96R06 1193 aa19.42■□□□□ 0.7
VHL-202ENST00000345392 RAB34Q9BZG1 259 aa19.42■□□□□ 0.7
VHL-202ENST00000345392 ZHX3Q9H4I2 956 aa19.42■□□□□ 0.7
VHL-202ENST00000345392 USP17L5A8MUK1 530 aa19.42■□□□□ 0.7
VHL-202ENST00000345392 E9PMD0 336 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms