RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 PITPNM2Q9BZ72 1349 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 SHMT1P34896 483 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 DHX36Q9H2U1 1008 aaKnown RBP25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 SERPINB13Q9UIV8 391 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 GREB1LQ9C091 1923 aaPredicted RBP25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 POTEFA5A3E0 1075 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 USP17L15C9J2P7 530 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 USP17L13C9JLJ4 530 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 USP17L11C9JVI0 530 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 USP17L18D6R9N7 530 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 USP17L22D6RA61 530 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 USP17L17D6RBQ6 530 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 USP17L19D6RCP7 530 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 USP17L20D6RJB6 530 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 POTEIP0CG38 1075 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 USP17L24Q0WX57 530 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 EMC10Q5UCC4 262 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 USP17L6PQ6QN14 398 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 POTEGQ6S5H5 508 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 POTEEQ6S8J3 1075 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 KLHL7Q8IXQ5 586 aa25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 RNPC3Q96LT9 517 aaKnown RBP25.35■■□□□ 1.65
NKX2-3-201ENST00000344586 MYO3BQ8WXR4 1341 aa25.34■■□□□ 1.65
NKX2-3-201ENST00000344586 KCNK3O14649 394 aa25.34■■□□□ 1.65
NKX2-3-201ENST00000344586 KRT18P05783 430 aaKnown RBP25.34■■□□□ 1.65
NKX2-3-201ENST00000344586 SLC9A1P19634 815 aa25.34■■□□□ 1.65
NKX2-3-201ENST00000344586 RPS6KA1Q15418 735 aa25.34■■□□□ 1.65
NKX2-3-201ENST00000344586 C10orf76Q5T2E6 689 aa25.34■■□□□ 1.65
NKX2-3-201ENST00000344586 TAF4BQ92750 862 aa25.34■■□□□ 1.65
NKX2-3-201ENST00000344586 ZHX3Q9H4I2 956 aa25.34■■□□□ 1.65
NKX2-3-201ENST00000344586 PLCB1Q9NQ66 1216 aa25.34■■□□□ 1.65
NKX2-3-201ENST00000344586 SAMM50Q9Y512 469 aa25.34■■□□□ 1.65
NKX2-3-201ENST00000344586 LY75O60449 1722 aa25.34■■□□□ 1.65
NKX2-3-201ENST00000344586 KIF4AO95239 1232 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 HSPA9P38646 679 aaKnown RBP25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 USP11P51784 963 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 LRRC57Q8N9N7 239 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 MBOAT7Q96N66 472 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 LTBP1Q14766 1721 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 CYP3A7-CYP3A51PA0A087WV96 503 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 UCHL3P15374 230 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 CYP3A7P24462 503 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 ECHS1P30084 290 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 HOXD13P35453 343 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 ERVK-9P63128 1117 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 GTF2IP78347 998 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 FRMD5Q7Z6J6 570 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 MICALL1Q8N3F8 863 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 GOLPH3Q9H4A6 298 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 TAF1DQ9H5J8 278 aaPredicted RBP25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 POLD4Q9HCU8 107 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 TRAF3IP3Q9Y228 551 aa25.33■■□□□ 1.65
NKX2-3-201ENST00000344586 NDUFAB1O14561 156 aa25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 C1orf131Q8NDD1 294 aaKnown RBP25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 RBM17Q96I25 401 aaKnown RBP25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 ANO3Q9BYT9 981 aa25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 QSER1Q2KHR3 1735 aa25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 ZEB2O60315 1214 aa25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 AFPP02771 609 aaKnown RBP25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 ZBTB48P10074 688 aaPredicted RBP25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 NR1D1P20393 614 aa25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 LIG3P49916 1009 aa25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 SPIRE1Q08AE8 756 aa25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 EPM2AIP1Q7L775 607 aaPredicted RBP25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 RBM46Q8TBY0 533 aaKnown RBP25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 SCFD2Q8WU76 684 aa25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 ATP6V1G3Q96LB4 118 aa25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 ISCUQ9H1K1 167 aa25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 ARMCX3Q9UH62 379 aaPredicted RBP25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 NAGPAQ9UK23 515 aa25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 NENFQ9UMX5 172 aa25.32■■□□□ 1.64
NKX2-3-201ENST00000344586 MYH4Q9Y623 1939 aa25.31■■□□□ 1.64
NKX2-3-201ENST00000344586 PON1P27169 355 aa25.31■■□□□ 1.64
NKX2-3-201ENST00000344586 LSP1P33241 339 aa25.31■■□□□ 1.64
NKX2-3-201ENST00000344586 GIT2Q14161 759 aa25.31■■□□□ 1.64
NKX2-3-201ENST00000344586 VPS72Q15906 364 aa25.31■■□□□ 1.64
NKX2-3-201ENST00000344586 QRICH1Q2TAL8 776 aa25.31■■□□□ 1.64
NKX2-3-201ENST00000344586 FAM196AQ6ZSG2 479 aa25.31■■□□□ 1.64
NKX2-3-201ENST00000344586 DNAAF5Q86Y56 855 aa25.31■■□□□ 1.64
NKX2-3-201ENST00000344586 PBKQ96KB5 322 aa25.31■■□□□ 1.64
NKX2-3-201ENST00000344586 SPAG5Q96R06 1193 aa25.31■■□□□ 1.64
NKX2-3-201ENST00000344586 BZW2Q9Y6E2 419 aaKnown RBP25.31■■□□□ 1.64
NKX2-3-201ENST00000344586 ATXN2Q99700 1313 aaKnown RBP25.31■■□□□ 1.64
NKX2-3-201ENST00000344586 F8W031 263 aaPredicted RBP25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 ERLIN2O94905 339 aa25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 PSMC6P62333 389 aa25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 GUCY1A3Q02108 690 aa25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 SFR1Q86XK3 245 aa25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 CATSPER3Q86XQ3 398 aa25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 EIF1ADQ8N9N8 165 aaKnown RBP25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 ACTRT1Q8TDG2 376 aa25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 PLAAQ9Y263 795 aa25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 KNOP1Q1ED39 458 aaKnown RBP25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 FAM182BQ5T319 152 aa25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 SLFN12Q8IYM2 578 aa25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 ETNPPLQ8TBG4 499 aa25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 REEP2Q9BRK0 252 aa25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 GLT8D2Q9H1C3 349 aa25.3■■□□□ 1.64
NKX2-3-201ENST00000344586 AJAP1Q9UKB5 411 aaPredicted RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms