RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 LRRC23Q53EV4 343 aaPredicted RBP13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 B4GALNT2Q8NHY0 566 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 SH3RF3Q8TEJ3 882 aaPredicted RBP13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 PIGSQ96S52 555 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 AMNQ9BXJ7 453 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 ZBTB40Q9NUA8 1239 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 DNAJC8O75937 253 aaPredicted RBP13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 CELF2O95319 508 aaKnown RBP13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 NME3Q13232 169 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 LBRQ14739 615 aaKnown RBP13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 SUPT3HB4E1H0 165 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 H0YCG3 227 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 PTH1RQ03431 593 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 TMED1Q13445 227 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 C10orf76Q5T2E6 689 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 ATL3Q6DD88 541 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 KRT80Q6KB66 452 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 RNF135Q8IUD6 432 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 GRAMD1CQ8IYS0 662 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 ZNF507Q8TCN5 953 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 HPCAL4Q9UM19 191 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 EIF2AK4Q9P2K8 1649 aaKnown RBP13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 CENPAP49450 140 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 CNOT6LQ96LI5 555 aaKnown RBP13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 LEMD3Q9Y2U8 911 aa13.19□□□□□ -0.3
TRIOBP-202ENST00000344404 SNAP23O00161 211 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 MOCS2O96007 188 aaPredicted RBP13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 SETSIPP0DME0 302 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 CROCCP2Q86T23 111 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 PI4KBQ9UBF8 816 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 CYP27A1Q02318 531 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 GUCY2DQ02846 1103 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 THEMIS2Q5TEJ8 643 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 DNAJC24Q6P3W2 148 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 PI16Q6UXB8 463 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 NOSTRINQ8IVI9 506 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 CYP2B6P20813 491 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 GCKP35557 465 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 UBE3AQ05086 875 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 C8orf34Q49A92 452 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 OGFRQ9NZT2 677 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 ABCB11O95342 1321 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 ZBTB7BO15156 539 aaPredicted RBP13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 GTPBP6O43824 516 aaPredicted RBP13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 SGO2Q562F6 1265 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 ACCSQ96QU6 501 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 EDEM3Q9BZQ6 932 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 ZNF233A6NK53 670 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
TRIOBP-202ENST00000344404 PFDN1O60925 122 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 HIP1RO75146 1068 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 FGAP02671 866 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 TUBB4AP04350 444 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 KIF17Q9P2E2 1029 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 KCNQ2O43526 872 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 KITP10721 976 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 CPB1P15086 417 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 ARL4DP49703 201 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 SNRNP48Q6IEG0 339 aaKnown RBP13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 EXOC8Q8IYI6 725 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 NDUFAF2Q8N183 169 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 HIPK4Q8NE63 616 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 MSTO1Q9BUK6 570 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 GOLGA8MH3BSY2 632 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 SNX2O60749 519 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 PEX3P56589 373 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 SPP2Q13103 211 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 TCP11X2Q5H9J9 407 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 FAM133AQ8N9E0 248 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 PIGOQ8TEQ8 1089 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 PIGBQ92521 554 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 ASMTLO95671 621 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 ARHGAP25P42331 645 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 FAM26FQ5R3K3 315 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 CYFIP1Q7L576 1253 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 BHMTQ93088 406 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 FSD1LQ9BXM9 530 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 NGRNQ9NPE2 291 aaKnown RBP13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 ZMYM6O95789 1325 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 CCDC85CA6NKD9 419 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 BRD1O95696 1058 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 CIITAP33076 1130 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 TBCKQ8TEA7 893 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 ERO1AQ96HE7 468 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 DNAJC6O75061 913 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 PSMC2P35998 433 aaKnown RBP13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 PSMC5P62195 406 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 RBBP7Q16576 425 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 SUSD4Q5VX71 490 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 SNX21Q969T3 373 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 GCNT4Q9P109 453 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 PALLDQ8WX93 1383 aa13.17□□□□□ -0.3
TRIOBP-202ENST00000344404 MED7O43513 233 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 MSH2P43246 934 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 RINLQ6ZS11 566 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 MAML1Q92585 1016 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 PSAPP07602 524 aa13.16□□□□□ -0.3
TRIOBP-202ENST00000344404 RNF168Q8IYW5 571 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms