RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 TTLL4Q14679 1199 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 UVSSAQ2YD98 709 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 SHC4Q6S5L8 630 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 SASS6Q6UVJ0 657 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 FBXO16Q8IX29 292 aaPredicted RBP15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 VTA1Q9NP79 307 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 FAM13BQ9NYF5 915 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 CYP39A1Q9NYL5 469 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 COL4A4P53420 1690 aaPredicted RBP15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 LOXHD1Q8IVV2 1947 aa15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 ZNF202O95125 648 aa15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 CA3P07451 260 aa15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 ALAS1P13196 640 aa15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 ATP2B1P20020 1258 aa15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 ADCY7P51828 1080 aa15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 ORC2Q13416 577 aaPredicted RBP15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 DUSP28Q4G0W2 176 aa15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 MUM1L1Q5H9M0 696 aa15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 KCTD1Q719H9 257 aa15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 EEPD1Q7L9B9 569 aa15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 CKAP2LQ8IYA6 745 aa15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 PANK2Q9BZ23 570 aa15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 GLT8D2Q9H1C3 349 aa15.23■□□□□ 0.03
HERPUD1-202ENST00000344114 EPOPA6NHQ4 379 aa15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 RFXAPO00287 272 aa15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 CAVIN2O95810 425 aa15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 SUPT20HL2P0C7V6 817 aa15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 PURAQ00577 322 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 NONOQ15233 471 aaKnown RBP eCLIP15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 ARL6IP4Q66PJ3 421 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 TTBK2Q6IQ55 1244 aa15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 BTNL9Q6UXG8 535 aa15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 REXO1Q8N1G1 1221 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 CLIC6Q96NY7 704 aa15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 SLC9A7Q96T83 725 aa15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 TRMT13Q9NUP7 481 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 COG5Q9UP83 839 aa15.22■□□□□ 0.03
HERPUD1-202ENST00000344114 GTPBP6O43824 516 aaPredicted RBP15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 CYP2C9P11712 490 aa15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 RFC2P35250 354 aa15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 SLC16A2P36021 539 aa15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 SKIV2LQ15477 1246 aaKnown RBP15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 ZNF174Q15697 407 aa15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 STX1AQ16623 288 aa15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 ELOA2Q8IYF1 753 aaPredicted RBP15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 PHOSPHO2Q8TCD6 241 aa15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 RASGRP4Q8TDF6 673 aa15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 SDF4Q9BRK5 362 aa15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 LRFN3Q9BTN0 628 aa15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 RIC8AQ9NPQ8 531 aa15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 MRVI1Q9Y6F6 885 aa15.21■□□□□ 0.02
HERPUD1-202ENST00000344114 TET1Q8NFU7 2136 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 LOC102724159A0A0B4J2E5 919 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 RBM47A0AV96 593 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 LAD1O00515 517 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 WNT7AO00755 349 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 ADAMTS3O15072 1205 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 TLL1O43897 1013 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 CCDC173Q0VFZ6 552 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 IKQ13123 557 aaPredicted RBP15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 PTGDRQ13258 359 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 PWP2Q15269 919 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 CDC37Q16543 378 aaPredicted RBP15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 SYDE2Q5VT97 1194 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 DEFB128Q7Z7B8 93 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 FAM200AQ8TCP9 573 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 PURBQ96QR8 312 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 EPHX3Q9H6B9 360 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 KCNH3Q9ULD8 1083 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 PRR12Q9ULL5 1215 aa15.2■□□□□ 0.02
HERPUD1-202ENST00000344114 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 ARHGEF15O94989 841 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 ACTN1P12814 892 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 MCM7P33993 719 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 CPT1AP50416 773 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 SNAP25P60880 206 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 TAP1Q03518 808 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 TRAF1Q13077 416 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 INF2Q27J81 1249 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 QRICH1Q2TAL8 776 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 RNF214Q8ND24 703 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 CUL5Q93034 780 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 CSRNP2Q9H175 543 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 CERS4Q9HA82 394 aa15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 HOOK1Q9UJC3 728 aaKnown RBP15.19■□□□□ 0.02
HERPUD1-202ENST00000344114 WDR81Q562E7 1941 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 TRIP12Q14669 1992 aaPredicted RBP15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 PPP1R11O60927 126 aaPredicted RBP15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 ICAM1P05362 532 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 PRPHP41219 470 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 ALDH5A1P51649 535 aaPredicted RBP15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 MRPL12P52815 198 aaKnown RBP15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 GRIN1Q05586 938 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 MCTP2Q6DN12 878 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 NSMFQ6X4W1 530 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 KRBA2Q6ZNG9 492 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 NEK8Q86SG6 692 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 TEX2Q8IWB9 1127 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 CCDC34Q96HJ3 373 aa15.18■□□□□ 0.02
HERPUD1-202ENST00000344114 PYM1Q9BRP8 204 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms