RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 OSGEPQ9NPF4 335 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 NR2E1Q9Y466 385 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 SHANK3Q9BYB0 1731 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 CDC37Q16543 378 aaPredicted RBP17.65■□□□□ 0.42
SCARB1-202ENST00000339570 PRR16Q569H4 304 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 CPLX4Q7Z7G2 160 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 METTL13Q8N6R0 699 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 DNAJC19Q96DA6 116 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 SPZ1Q9BXG8 430 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 AJAP1Q9UKB5 411 aaPredicted RBP17.65■□□□□ 0.42
SCARB1-202ENST00000339570 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.65■□□□□ 0.42
SCARB1-202ENST00000339570 MYH14Q7Z406 1995 aaKnown RBP17.65■□□□□ 0.42
SCARB1-202ENST00000339570 CHMP2AO43633 222 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 EDIL3O43854 480 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 AADACL2Q6P093 401 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 ADGRF4Q8IZF3 695 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 WDR66Q8TBY9 1149 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 SCFD1Q8WVM8 642 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 HAS1Q92839 578 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 INPP4AQ96PE3 977 aaPredicted RBP17.65■□□□□ 0.42
SCARB1-202ENST00000339570 TAF1DQ9H5J8 278 aaPredicted RBP17.65■□□□□ 0.42
SCARB1-202ENST00000339570 STK17AQ9UEE5 414 aa17.65■□□□□ 0.42
SCARB1-202ENST00000339570 PVALEFA0A1B0GWK0 134 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 CETN3O15182 167 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 BUB1BO60566 1050 aaPredicted RBP17.64■□□□□ 0.41
SCARB1-202ENST00000339570 PRLRP16471 622 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 RFC4P35249 363 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 IFNAR2P48551 515 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 ARHGAP44Q17R89 818 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 MAEAQ7L5Y9 396 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 TAX1BP1Q86VP1 789 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 CCDC65Q8IXS2 484 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 CNOT8Q9UFF9 292 aaKnown RBP17.64■□□□□ 0.41
SCARB1-202ENST00000339570 KIF4AO95239 1232 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 MYBP10242 640 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 KRT13P13646 458 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 RDXP35241 583 aaKnown RBP17.64■□□□□ 0.41
SCARB1-202ENST00000339570 CASZ1Q86V15 1759 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 PLCH1Q4KWH8 1693 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 PPP1R11O60927 126 aaPredicted RBP17.64■□□□□ 0.41
SCARB1-202ENST00000339570 CDR1P51861 262 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 TCP10Q12799 353 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 UAP1Q16222 522 aaPredicted RBP17.64■□□□□ 0.41
SCARB1-202ENST00000339570 KDM7AQ6ZMT4 941 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 GLG1Q92896 1179 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 CYFIP2Q96F07 1278 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 PSTPIP2Q9H939 334 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 HAUS2Q9NVX0 235 aa17.64■□□□□ 0.41
SCARB1-202ENST00000339570 SSU72P8A0A1W2PR75 194 aa17.63■□□□□ 0.41
SCARB1-202ENST00000339570 PJA2O43164 708 aa17.63■□□□□ 0.41
SCARB1-202ENST00000339570 SFR1Q86XK3 245 aa17.63■□□□□ 0.41
SCARB1-202ENST00000339570 CCDC13Q8IYE1 715 aa17.63■□□□□ 0.41
SCARB1-202ENST00000339570 RNF10Q8N5U6 811 aaKnown RBP17.63■□□□□ 0.41
SCARB1-202ENST00000339570 TBC1D31Q96DN5 1066 aa17.63■□□□□ 0.41
SCARB1-202ENST00000339570 OPLAHO14841 1288 aa17.63■□□□□ 0.41
SCARB1-202ENST00000339570 LRRN2O75325 713 aa17.63■□□□□ 0.41
SCARB1-202ENST00000339570 GCNT3O95395 438 aa17.63■□□□□ 0.41
SCARB1-202ENST00000339570 FGGP02679 453 aa17.63■□□□□ 0.41
SCARB1-202ENST00000339570 MAP2K2P36507 400 aa17.63■□□□□ 0.41
SCARB1-202ENST00000339570 GTF2IP78347 998 aa17.63■□□□□ 0.41
SCARB1-202ENST00000339570 SKOR1P84550 965 aa17.63■□□□□ 0.41
SCARB1-202ENST00000339570 EXOC3L4Q17RC7 722 aa17.63■□□□□ 0.41
SCARB1-202ENST00000339570 ARMCX3Q9UH62 379 aaPredicted RBP17.63■□□□□ 0.41
SCARB1-202ENST00000339570 MED24O75448 989 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 USP8P40818 1118 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 PPP1R2P41236 205 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 ADCY1Q08828 1119 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 ITGB3BPQ13352 177 aaPredicted RBP17.62■□□□□ 0.41
SCARB1-202ENST00000339570 CCDC25Q86WR0 208 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 GLYCTKQ8IVS8 523 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 PIGOQ8TEQ8 1089 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 ZNF287Q9HBT7 754 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 TMOD4Q9NZQ9 345 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 UCHL3P15374 230 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 UBXN2AP68543 259 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 NEDD1Q8NHV4 660 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 MGARPQ8TDB4 240 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 RTFDC1Q9BY42 306 aaPredicted RBP17.62■□□□□ 0.41
SCARB1-202ENST00000339570 RIC8AQ9NPQ8 531 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 ZNF844Q08AG5 666 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 CCDC38Q502W7 563 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 MICALCLQ6ZW33 695 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 ZNF804AQ7Z570 1209 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 RBM46Q8TBY0 533 aaKnown RBP17.62■□□□□ 0.41
SCARB1-202ENST00000339570 JMJD4Q9H9V9 463 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 MLXIPLQ9NP71 852 aa17.62■□□□□ 0.41
SCARB1-202ENST00000339570 LCA5LO95447 670 aa17.61■□□□□ 0.41
SCARB1-202ENST00000339570 LDHCP07864 332 aa17.61■□□□□ 0.41
SCARB1-202ENST00000339570 ELMO3Q96BJ8 720 aa17.61■□□□□ 0.41
SCARB1-202ENST00000339570 LZTS2Q9BRK4 669 aa17.61■□□□□ 0.41
SCARB1-202ENST00000339570 GCNT4Q9P109 453 aa17.61■□□□□ 0.41
SCARB1-202ENST00000339570 TSKSQ9UJT2 592 aa17.61■□□□□ 0.41
SCARB1-202ENST00000339570 PNMA2Q9UL42 364 aa17.61■□□□□ 0.41
SCARB1-202ENST00000339570 A0A1B0GUL6 1792 aa17.61■□□□□ 0.41
SCARB1-202ENST00000339570 DCCP43146 1447 aa17.61■□□□□ 0.41
SCARB1-202ENST00000339570 ANKRD36CQ5JPF3 1778 aa17.61■□□□□ 0.41
SCARB1-202ENST00000339570 RPSAP08865 295 aaKnown RBP17.61■□□□□ 0.41
SCARB1-202ENST00000339570 HOXA13P31271 388 aaPredicted RBP17.61■□□□□ 0.41
SCARB1-202ENST00000339570 PLTPP55058 493 aa17.61■□□□□ 0.41
SCARB1-202ENST00000339570 GSTO1P78417 241 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms