RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ERO1BQ86YB8 467 aa24.86■■□□□ 1.57
PDLIM2-203ENST00000339162 TSG101Q99816 390 aa24.86■■□□□ 1.57
PDLIM2-203ENST00000339162 NOC4LQ9BVI4 516 aaKnown RBP24.86■■□□□ 1.57
PDLIM2-203ENST00000339162 ITIH6Q6UXX5 1313 aa24.86■■□□□ 1.57
PDLIM2-203ENST00000339162 MYPNQ86TC9 1320 aa24.86■■□□□ 1.57
PDLIM2-203ENST00000339162 PAPPA2Q9BXP8 1791 aa24.86■■□□□ 1.57
PDLIM2-203ENST00000339162 TBCAO75347 108 aaKnown RBP24.85■■□□□ 1.57
PDLIM2-203ENST00000339162 POTEJP0CG39 1038 aa24.85■■□□□ 1.57
PDLIM2-203ENST00000339162 ZCWPW2Q504Y3 356 aa24.85■■□□□ 1.57
PDLIM2-203ENST00000339162 C1orf186Q6ZWK4 172 aa24.85■■□□□ 1.57
PDLIM2-203ENST00000339162 TRAF5O00463 557 aa24.85■■□□□ 1.57
PDLIM2-203ENST00000339162 MYBP10242 640 aa24.85■■□□□ 1.57
PDLIM2-203ENST00000339162 CCND2P30279 289 aa24.85■■□□□ 1.57
PDLIM2-203ENST00000339162 MIIPQ5JXC2 388 aa24.85■■□□□ 1.57
PDLIM2-203ENST00000339162 LBX2Q6XYB7 198 aa24.85■■□□□ 1.57
PDLIM2-203ENST00000339162 NSUN6Q8TEA1 469 aaKnown RBP24.85■■□□□ 1.57
PDLIM2-203ENST00000339162 A0A0G2JLL6 359 aaPredicted RBP24.84■■□□□ 1.57
PDLIM2-203ENST00000339162 MFAP3LO75121 409 aa24.84■■□□□ 1.57
PDLIM2-203ENST00000339162 PRRT2Q7Z6L0 340 aaPredicted RBP24.84■■□□□ 1.57
PDLIM2-203ENST00000339162 SH2D3AQ9BRG2 576 aa24.84■■□□□ 1.57
PDLIM2-203ENST00000339162 TBC1D22BQ9NU19 505 aa24.84■■□□□ 1.57
PDLIM2-203ENST00000339162 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.84■■□□□ 1.57
PDLIM2-203ENST00000339162 KLK7P49862 253 aa24.84■■□□□ 1.57
PDLIM2-203ENST00000339162 PAGR1Q9BTK6 254 aa24.84■■□□□ 1.57
PDLIM2-203ENST00000339162 KCTD10Q9H3F6 313 aa24.84■■□□□ 1.57
PDLIM2-203ENST00000339162 MRPL44Q9H9J2 332 aaKnown RBP24.84■■□□□ 1.57
PDLIM2-203ENST00000339162 SPDYE5A6NIY4 337 aa24.83■■□□□ 1.57
PDLIM2-203ENST00000339162 RGS20O76081 388 aa24.83■■□□□ 1.57
PDLIM2-203ENST00000339162 PRPF6O94906 941 aaKnown RBP24.83■■□□□ 1.57
PDLIM2-203ENST00000339162 CCNE2O96020 404 aa24.83■■□□□ 1.57
PDLIM2-203ENST00000339162 TNNT1P13805 278 aa24.83■■□□□ 1.57
PDLIM2-203ENST00000339162 TBC1D8BQ0IIM8 1120 aa24.83■■□□□ 1.57
PDLIM2-203ENST00000339162 KCTD17Q8N5Z5 321 aa24.83■■□□□ 1.57
PDLIM2-203ENST00000339162 CLEC11AQ9Y240 323 aa24.83■■□□□ 1.57
PDLIM2-203ENST00000339162 SORBS3O60504 671 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 P4HBP07237 508 aaKnown RBP24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 IRX3P78415 501 aaPredicted RBP24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 CNTN2Q02246 1040 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 ANKRD35Q8N283 1001 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 OPTNQ96CV9 577 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 PPP1R13BQ96KQ4 1090 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 TMEM150BA6NC51 233 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 ARHGAP6O43182 974 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 STX10O60499 249 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 TPM2P07951 284 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 DNM2P50570 870 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 MTF1Q14872 753 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 UGCGQ16739 394 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 MAEAQ7L5Y9 396 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 MYCT1Q8N699 235 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 R3HDMLQ9H3Y0 253 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 ZNF408Q9H9D4 720 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 COL4A3BPQ9Y5P4 624 aa24.82■■□□□ 1.56
PDLIM2-203ENST00000339162 FAM13AO94988 1023 aa24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 GCNT3O95395 438 aa24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 MUTP22033 750 aa24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 HOXA7P31268 230 aaPredicted RBP24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 HOXD13P35453 343 aa24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 FKBP3Q00688 224 aaKnown RBP24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 KCNA1Q09470 495 aa24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 FSTL1Q12841 308 aa24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 PROCA1Q8NCQ7 364 aaPredicted RBP24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 PANX2Q96RD6 677 aa24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 ASCC2Q9H1I8 757 aaPredicted RBP24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 ZSWIM4Q9H7M6 989 aa24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 ARHGEF35A5YM69 484 aa24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 SOWAHDA6NJG2 315 aa24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 FGFR1OPO95684 399 aaKnown RBP24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 SYCP1Q15431 976 aa24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 TOGARAM2Q6ZUX3 1019 aa24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 INPP4AQ96PE3 977 aaPredicted RBP24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 TELO2Q9Y4R8 837 aa24.81■■□□□ 1.56
PDLIM2-203ENST00000339162 TPM1P09493 284 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 NMT1P30419 496 aaKnown RBP24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 KCNJ6P48051 423 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 PTPN14Q15678 1187 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 MAP1SQ66K74 1059 aaPredicted RBP24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 EPM2AIP1Q7L775 607 aaPredicted RBP24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 NCAPG2Q86XI2 1143 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 CNGA4Q8IV77 575 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 NEK9Q8TD19 979 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 KCND1Q9NSA2 647 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 TCEAL9Q9UHQ7 104 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 ASTN1O14525 1302 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 A0A1W2PQC6 194 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 TTC26A0AVF1 554 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 IQCA1LA6NCM1 817 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 CXCL11O14625 94 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 QARSP47897 775 aaKnown RBP24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 SP4Q02446 784 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 NYAP1Q6ZVC0 841 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 ZNF592Q92610 1267 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 IKZF4Q9H2S9 585 aa24.8■■□□□ 1.56
PDLIM2-203ENST00000339162 KIF20AO95235 890 aa24.79■■□□□ 1.56
PDLIM2-203ENST00000339162 VWA3BQ502W6 1294 aa24.79■■□□□ 1.56
PDLIM2-203ENST00000339162 XRRA1Q6P2D8 792 aa24.79■■□□□ 1.56
PDLIM2-203ENST00000339162 NLRX1Q86UT6 975 aa24.79■■□□□ 1.56
PDLIM2-203ENST00000339162 CHST13Q8NET6 341 aa24.79■■□□□ 1.56
PDLIM2-203ENST00000339162 GPRASP2Q96D09 838 aa24.79■■□□□ 1.56
PDLIM2-203ENST00000339162 PCMTD1Q96MG8 357 aaPredicted RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms