RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 CDAN1Q8IWY9 1227 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 DCAF4Q8WV16 495 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 OSBPL9Q96SU4 736 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 SH2D4AQ9H788 454 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 NYAP2Q9P242 653 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 A0A087X0T9 212 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 EML1O00423 815 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 FAM228BP0C875 321 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 PRPF4BQ13523 1007 aaKnown RBP10.68□□□□□ -0.7
MSL3-202ENST00000337339 EXOC3L4Q17RC7 722 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 SIAH1Q8IUQ4 282 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 TAF4BQ92750 862 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 EIF2AK1Q9BQI3 630 aaKnown RBP10.68□□□□□ -0.7
MSL3-202ENST00000337339 RUSC1Q9BVN2 902 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 GLT8D2Q9H1C3 349 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 ARHGEF10LQ9HCE6 1279 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 ZNF277Q9NRM2 450 aaPredicted RBP10.68□□□□□ -0.7
MSL3-202ENST00000337339 DMGDHQ9UI17 866 aaKnown RBP10.68□□□□□ -0.7
MSL3-202ENST00000337339 SNX12Q9UMY4 172 aa10.68□□□□□ -0.7
MSL3-202ENST00000337339 CTDP1Q9Y5B0 961 aaPredicted RBP10.68□□□□□ -0.7
MSL3-202ENST00000337339 CASZ1Q86V15 1759 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 MYBL2P10244 700 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 CLK2P49760 499 aaKnown RBP10.67□□□□□ -0.7
MSL3-202ENST00000337339 SP4Q02446 784 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 ARHGAP44Q17R89 818 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 TTC19Q6DKK2 380 aaPredicted RBP10.67□□□□□ -0.7
MSL3-202ENST00000337339 C8orf74Q6P047 294 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 MSANTD4Q8NCY6 345 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 DYDC2Q96IM9 177 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 LTBP4Q8N2S1 1624 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 ABCB4P21439 1286 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 KLRC1P26715 233 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 GUCY2FP51841 1108 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 MAPK8IP2Q13387 824 aaPredicted RBP10.67□□□□□ -0.7
MSL3-202ENST00000337339 HLTFQ14527 1009 aaKnown RBP eCLIP10.67□□□□□ -0.7
MSL3-202ENST00000337339 RRP1BQ14684 758 aaKnown RBP10.67□□□□□ -0.7
MSL3-202ENST00000337339 PAPD7Q5XG87 772 aaKnown RBP10.67□□□□□ -0.7
MSL3-202ENST00000337339 SPATA4Q8NEY3 305 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 NAP1L4Q99733 375 aaKnown RBP10.67□□□□□ -0.7
MSL3-202ENST00000337339 TMEM39BQ9GZU3 492 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 FAM204AQ9H8W3 233 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 FAM53CQ9NYF3 392 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 HYOU1Q9Y4L1 999 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 KCNK3O14649 394 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 SORBS3O60504 671 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 EPB41P11171 864 aaKnown RBP10.67□□□□□ -0.7
MSL3-202ENST00000337339 GIT2Q14161 759 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 KNOP1Q1ED39 458 aaKnown RBP10.67□□□□□ -0.7
MSL3-202ENST00000337339 BANK1Q8NDB2 785 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 BAP1Q92560 729 aa10.67□□□□□ -0.7
MSL3-202ENST00000337339 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.67□□□□□ -0.7
MSL3-202ENST00000337339 A0A1W2PQJ5 194 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 ANKRD65E5RJM6 399 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 GCOM1H8Y6P7 765 aaPredicted RBP10.66□□□□□ -0.7
MSL3-202ENST00000337339 POLR2MP0CAP2 368 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 CYP2C19P33261 490 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 TUBB4BP68371 445 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 ODR4Q5SWX8 454 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 ADAT2Q7Z6V5 191 aaKnown RBP10.66□□□□□ -0.7
MSL3-202ENST00000337339 PCIF1Q9H4Z3 704 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 CEP72Q9P209 647 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 RAB21Q9UL25 225 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 ATF5Q9Y2D1 282 aaPredicted RBP10.66□□□□□ -0.7
MSL3-202ENST00000337339 PPP1R12BO60237 982 aaPredicted RBP10.66□□□□□ -0.7
MSL3-202ENST00000337339 RNF40O75150 1001 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 AKAP3O75969 853 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 GFPT2O94808 682 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 SERPING1P05155 500 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 AP3B2Q13367 1082 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 ZSCAN26Q16670 478 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 PIAS4Q8N2W9 510 aaPredicted RBP10.66□□□□□ -0.7
MSL3-202ENST00000337339 SELENOOQ9BVL4 669 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 KCNMB3Q9NPA1 279 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 GCNT4Q9P109 453 aa10.66□□□□□ -0.7
MSL3-202ENST00000337339 ZSCAN5CA6NGD5 496 aaPredicted RBP10.65□□□□□ -0.7
MSL3-202ENST00000337339 CALUO43852 315 aaPredicted RBP10.65□□□□□ -0.7
MSL3-202ENST00000337339 CEP104O60308 925 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 TLR2O60603 784 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 LRRN2O75325 713 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 GNA14O95837 355 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 FOSP01100 380 aaPredicted RBP10.65□□□□□ -0.7
MSL3-202ENST00000337339 AFPP02771 609 aaKnown RBP10.65□□□□□ -0.7
MSL3-202ENST00000337339 NR3C1P04150 777 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 TRIM49P0CI25 452 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 TRIM49CP0CI26 452 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 MCM3P25205 808 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 RPL13P26373 211 aaKnown RBP10.65□□□□□ -0.7
MSL3-202ENST00000337339 GGCXP38435 758 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 PTK2Q05397 1052 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 COG2Q14746 738 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 FIGNQ5HY92 759 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 TAF3Q5VWG9 929 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 FAM178BQ8IXR5 827 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 TXLNBQ8N3L3 684 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 U2AF1L4Q8WU68 220 aaKnown RBP10.65□□□□□ -0.7
MSL3-202ENST00000337339 KRT12Q99456 494 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 ZNF577Q9BSK1 485 aa10.65□□□□□ -0.7
MSL3-202ENST00000337339 GLIS2Q9BZE0 524 aaPredicted RBP10.65□□□□□ -0.7
MSL3-202ENST00000337339 COL5A3P25940 1745 aaPredicted RBP10.65□□□□□ -0.7
MSL3-202ENST00000337339 ABCB11O95342 1321 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms