RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 KIF5AQ12840 1032 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 MEA1Q16626 185 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 MYCT1Q8N699 235 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 GPR161Q8N6U8 529 aaKnown RBP9.77□□□□□ -0.85
SNCA-201ENST00000336904 BAP1Q92560 729 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 NT5C3AQ9H0P0 336 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 KCTD10Q9H3F6 313 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 ARHGEF10LQ9HCE6 1279 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 RAVER2Q9HCJ3 691 aaKnown RBP9.77□□□□□ -0.85
SNCA-201ENST00000336904 ARFGAP3Q9NP61 516 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 ADAMTS1Q9UHI8 967 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 RABGAP1Q9Y3P9 1069 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 SAMM50Q9Y512 469 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 MYO3BQ8WXR4 1341 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 H3BQF6 201 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 WNT10BO00744 389 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 KRT86O43790 486 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 AKAP3O75969 853 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 KCNA3P22001 575 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 OAS2P29728 719 aaKnown RBP9.76□□□□□ -0.85
SNCA-201ENST00000336904 SREBF1P36956 1147 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 USP11P51784 963 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 KCNH2Q12809 1159 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 BMS1Q14692 1282 aaKnown RBP9.76□□□□□ -0.85
SNCA-201ENST00000336904 SMAP1Q8IYB5 467 aaPredicted RBP9.76□□□□□ -0.85
SNCA-201ENST00000336904 GMCL1P1Q8NEA9 526 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 HDAC7Q8WUI4 952 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 CRYGNQ8WXF5 182 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 GMCL1Q96IK5 515 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 CAMKK2Q96RR4 588 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 WDR11Q9BZH6 1224 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 GREB1LQ9C091 1923 aaPredicted RBP9.76□□□□□ -0.85
SNCA-201ENST00000336904 KDM3AQ9Y4C1 1321 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 IGLV3-22A0A075B6J6 115 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 TMCO5BA8MYB1 307 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 GAS7O60861 476 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 TRIM49P0CI25 452 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 TRIM49CP0CI26 452 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 NT5C2P49902 561 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 LRRC63Q05C16 580 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.76□□□□□ -0.85
SNCA-201ENST00000336904 LDHDQ86WU2 507 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 ZSWIM2Q8NEG5 633 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 RABGGTAQ92696 567 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 SECISBP2LQ93073 1101 aaKnown RBP9.76□□□□□ -0.85
SNCA-201ENST00000336904 HAUS4Q9H6D7 363 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 TELO2Q9Y4R8 837 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 SAR1BQ9Y6B6 198 aa9.76□□□□□ -0.85
SNCA-201ENST00000336904 TBCAO75347 108 aaKnown RBP9.75□□□□□ -0.85
SNCA-201ENST00000336904 ENTPD3O75355 529 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 TUBB4AP04350 444 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 MYBL2P10244 700 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 EIF2AK2P19525 551 aaKnown RBP9.75□□□□□ -0.85
SNCA-201ENST00000336904 MAGEA1P43355 309 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 TNNT3P45378 269 aaPredicted RBP9.75□□□□□ -0.85
SNCA-201ENST00000336904 RASA3Q14644 834 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 UTP14CQ5TAP6 766 aaKnown RBP9.75□□□□□ -0.85
SNCA-201ENST00000336904 HAUS3Q68CZ6 603 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 HOOK2Q96ED9 719 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 UNC45AQ9H3U1 944 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 PCIF1Q9H4Z3 704 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 PDE11AQ9HCR9 933 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 HDAC9Q9UKV0 1011 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 CCPG1Q9ULG6 757 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 A0A087X0T9 212 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 GCOM1H8Y6P7 765 aaPredicted RBP9.75□□□□□ -0.85
SNCA-201ENST00000336904 SLITRK3O94933 977 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 FAM228BP0C875 321 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 POLR2MP0CAP2 368 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 MYCLP12524 364 aaPredicted RBP9.75□□□□□ -0.85
SNCA-201ENST00000336904 SOX10P56693 466 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 KRT83P78385 493 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 SKIDA1Q1XH10 827 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 MUM1L1Q5H9M0 696 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 PDXDC1Q6P996 788 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 NIM1KQ8IY84 436 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 SLFN12Q8IYM2 578 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 RIN2Q8WYP3 895 aaPredicted RBP9.75□□□□□ -0.85
SNCA-201ENST00000336904 ZNF577Q9BSK1 485 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 FUT8Q9BYC5 575 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 PLAGL2Q9UPG8 496 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 HYOU1Q9Y4L1 999 aa9.75□□□□□ -0.85
SNCA-201ENST00000336904 RPA1P27694 616 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 VAV2P52735 878 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 DMTNQ08495 405 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 AP3B2Q13367 1082 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 HGSNATQ68CP4 663 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 RINT1Q6NUQ1 792 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 TRAPPC11Q7Z392 1133 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 CEP112Q8N8E3 955 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 NUP58Q9BVL2 599 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 GOPCQ9HD26 462 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 CHORDC1Q9UHD1 332 aaPredicted RBP9.74□□□□□ -0.85
SNCA-201ENST00000336904 USP20Q9Y2K6 914 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 TMX2Q9Y320 296 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 ASTN1O14525 1302 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 EIF3CLB5ME19 914 aaKnown RBP9.74□□□□□ -0.85
SNCA-201ENST00000336904 FAM13AO94988 1023 aa9.74□□□□□ -0.85
SNCA-201ENST00000336904 HDLBPQ00341 1268 aaKnown RBP9.74□□□□□ -0.85
SNCA-201ENST00000336904 SMC1AQ14683 1233 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms