RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 EYA3Q99504 573 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 TBC1D23Q9NUY8 699 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 GCNT4Q9P109 453 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 GGT7Q9UJ14 662 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 ZMYM3Q14202 1370 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 CACNB1Q02641 598 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 LARP4BQ92615 738 aaKnown RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 UBE2TQ9NPD8 197 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 TNRQ92752 1358 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 CLIC2O15247 247 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 GOLGA8HP0CJ92 632 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 PRPF38AQ8NAV1 312 aaKnown RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 KIF17Q9P2E2 1029 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 THRAP3Q9Y2W1 955 aaKnown RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 MED23Q9ULK4 1368 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 CFAP69A5D8W1 941 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 MEFVO15553 781 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 PDE8AO60658 829 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 CHEK2O96017 543 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 RARS2Q5T160 578 aaKnown RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 ANGPTL8Q6UXH0 198 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 ADCK1Q86TW2 530 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 IFNL3Q8IZI9 196 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 NAF1Q96HR8 494 aaKnown RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 RBM17Q96I25 401 aaKnown RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 CALN1Q9BXU9 219 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 KLC2Q9H0B6 622 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 CUEDC2Q9H467 287 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 MRPL40Q9NQ50 206 aaKnown RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 NCKAP5LQ9HCH0 1330 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 CCDC188H7C350 402 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 PODXLO00592 558 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 TSPY1Q01534 308 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 MKRN3Q13064 507 aaKnown RBP10.53□□□□□ -0.72
COL4A6-201ENST00000334504 DRP2Q13474 957 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 ZBTB8OSQ8IWT0 167 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 CARD14Q9BXL6 1004 aa10.53□□□□□ -0.72
COL4A6-201ENST00000334504 TNKSO95271 1327 aa10.52□□□□□ -0.72
COL4A6-201ENST00000334504 UBE3AQ05086 875 aa10.52□□□□□ -0.72
COL4A6-201ENST00000334504 BTNL9Q6UXG8 535 aa10.52□□□□□ -0.72
COL4A6-201ENST00000334504 KIF24Q5T7B8 1368 aa10.52□□□□□ -0.72
COL4A6-201ENST00000334504 MAP4P27816 1152 aaKnown RBP10.52□□□□□ -0.72
COL4A6-201ENST00000334504 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.52□□□□□ -0.72
COL4A6-201ENST00000334504 ABCC12Q96J65 1359 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 SERPINB10P48595 397 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 CYP4A11Q02928 519 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 GALNT17Q6IS24 598 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 DNAJC24Q6P3W2 148 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 FLCNQ8NFG4 579 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 DTX3LQ8TDB6 740 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 ZNF473Q8WTR7 871 aaKnown RBP10.52□□□□□ -0.73
COL4A6-201ENST00000334504 CDCA7Q9BWT1 371 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-201ENST00000334504 TEKT3Q9BXF9 490 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 TESPA1A2RU30 521 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-201ENST00000334504 VCAM1P19320 739 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 BLVRAP53004 296 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 AP1B1Q10567 949 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 ODR4Q5SWX8 454 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 LONP2Q86WA8 852 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 PDIK1LQ8N165 341 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 LINC00301Q8NCQ3 95 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 FAF2Q96CS3 445 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 FOXP1Q9H334 677 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-201ENST00000334504 KIF9Q9HAQ2 790 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 ABCF3Q9NUQ8 709 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 FAM8A1Q9UBU6 413 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 SUN2Q9UH99 717 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 KRT37O76014 449 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 KLC1Q07866 573 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 CAPRIN1Q14444 709 aaKnown RBP10.52□□□□□ -0.73
COL4A6-201ENST00000334504 KLC3Q6P597 504 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 BZW1Q7L1Q6 419 aaKnown RBP10.52□□□□□ -0.73
COL4A6-201ENST00000334504 KRT27Q7Z3Y8 459 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 TTC30BQ8N4P2 665 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 SUPT20HQ8NEM7 779 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 BTBD6Q96KE9 485 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 PRAG1Q86YV5 1406 aa10.52□□□□□ -0.73
COL4A6-201ENST00000334504 SERPINB3P29508 390 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 ERFP50548 548 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 NSUN7Q8NE18 718 aaKnown RBP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 ZBTB18Q99592 522 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 SLC38A10Q9HBR0 1119 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 MRPL47Q9HD33 250 aaKnown RBP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 GTSE1Q9NYZ3 720 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 FBXO2Q9UK22 296 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 TRIM33Q9UPN9 1127 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 DIS3Q9Y2L1 958 aaKnown RBP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 SERPINB2P05120 415 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 TAC1P20366 129 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 ZC3H15Q8WU90 426 aaKnown RBP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 GLG1Q92896 1179 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 PCIF1Q9H4Z3 704 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 GEMIN8Q9NWZ8 242 aaKnown RBP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 CUL7Q14999 1698 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 ESYT3A0FGR9 886 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 DDAH1O94760 285 aa10.51□□□□□ -0.73
COL4A6-201ENST00000334504 FMNL1O95466 1100 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-201ENST00000334504 TCP10Q12799 353 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms