RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 ZNF277Q9NRM2 450 aaPredicted RBP20.87■□□□□ 0.93
RFTN1-201ENST00000334133 LRRIQ3A6PVS8 624 aaPredicted RBP20.86■□□□□ 0.93
RFTN1-201ENST00000334133 CASP4P49662 377 aa20.86■□□□□ 0.93
RFTN1-201ENST00000334133 STAT2P52630 851 aa20.86■□□□□ 0.93
RFTN1-201ENST00000334133 SFMBT2Q5VUG0 894 aa20.86■□□□□ 0.93
RFTN1-201ENST00000334133 TRMT1LQ7Z2T5 733 aaKnown RBP20.86■□□□□ 0.93
RFTN1-201ENST00000334133 HDXQ7Z353 690 aa20.86■□□□□ 0.93
RFTN1-201ENST00000334133 WDR18Q9BV38 432 aa20.86■□□□□ 0.93
RFTN1-201ENST00000334133 TMEM39BQ9GZU3 492 aa20.86■□□□□ 0.93
RFTN1-201ENST00000334133 VAV3Q9UKW4 847 aa20.86■□□□□ 0.93
RFTN1-201ENST00000334133 CETN3O15182 167 aa20.86■□□□□ 0.93
RFTN1-201ENST00000334133 GCNT3O95395 438 aa20.86■□□□□ 0.93
RFTN1-201ENST00000334133 CNKSR1Q969H4 720 aa20.86■□□□□ 0.93
RFTN1-201ENST00000334133 TULP1O00294 542 aaPredicted RBP20.85■□□□□ 0.93
RFTN1-201ENST00000334133 MYBL2P10244 700 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 Q4G0T1 1027 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 SYT2Q8N9I0 419 aaPredicted RBP20.85■□□□□ 0.93
RFTN1-201ENST00000334133 HDAC7Q8WUI4 952 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 HNRNPLLQ8WVV9 542 aaKnown RBP20.85■□□□□ 0.93
RFTN1-201ENST00000334133 PACSIN1Q9BY11 444 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 ADAMTS1Q9UHI8 967 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 C10orf71Q711Q0 1435 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 ABCB11O95342 1321 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 CCDC102AQ96A19 550 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 HDAC9Q9UKV0 1011 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 SNX12Q9UMY4 172 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 DDX39AO00148 427 aaKnown RBP20.85■□□□□ 0.93
RFTN1-201ENST00000334133 ENTPD3O75355 529 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 ZC2HC1CQ53FD0 456 aaPredicted RBP20.85■□□□□ 0.93
RFTN1-201ENST00000334133 ZNF662Q6ZS27 426 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 TRIM58Q8NG06 486 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 CEP63Q96MT8 703 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 TSGA10Q9BZW7 698 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 CEP72Q9P209 647 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 VPS18Q9P253 973 aa20.85■□□□□ 0.93
RFTN1-201ENST00000334133 PACSIN2Q9UNF0 486 aaPredicted RBP20.85■□□□□ 0.93
RFTN1-201ENST00000334133 SLC7A5Q01650 507 aa20.84■□□□□ 0.93
RFTN1-201ENST00000334133 KCTD19Q17RG1 926 aaPredicted RBP20.84■□□□□ 0.93
RFTN1-201ENST00000334133 ASTE1Q2TB18 679 aaPredicted RBP20.84■□□□□ 0.93
RFTN1-201ENST00000334133 SLC9C1Q4G0N8 1177 aa20.84■□□□□ 0.93
RFTN1-201ENST00000334133 CREG2Q8IUH2 290 aa20.84■□□□□ 0.93
RFTN1-201ENST00000334133 DYDC2Q96IM9 177 aa20.84■□□□□ 0.93
RFTN1-201ENST00000334133 MS4A14Q96JA4 679 aa20.84■□□□□ 0.93
RFTN1-201ENST00000334133 TMOD2Q9NZR1 351 aa20.84■□□□□ 0.93
RFTN1-201ENST00000334133 RABGAP1Q9Y3P9 1069 aa20.84■□□□□ 0.93
RFTN1-201ENST00000334133 PCDHB13Q9Y5F0 798 aa20.84■□□□□ 0.93
RFTN1-201ENST00000334133 A0A087X0T9 212 aa20.84■□□□□ 0.93
RFTN1-201ENST00000334133 AKAP3O75969 853 aa20.84■□□□□ 0.93
RFTN1-201ENST00000334133 FAM228BP0C875 321 aa20.84■□□□□ 0.93
RFTN1-201ENST00000334133 NMT1P30419 496 aaKnown RBP20.84■□□□□ 0.93
RFTN1-201ENST00000334133 RNASE9P60153 205 aaKnown RBP20.84■□□□□ 0.93
RFTN1-201ENST00000334133 EN1Q05925 392 aaPredicted RBP20.84■□□□□ 0.93
RFTN1-201ENST00000334133 KNOP1Q1ED39 458 aaKnown RBP20.84■□□□□ 0.93
RFTN1-201ENST00000334133 JRKLQ9Y4A0 524 aa20.84■□□□□ 0.93
RFTN1-201ENST00000334133 SPDYE2BA6NHP3 402 aa20.83■□□□□ 0.93
RFTN1-201ENST00000334133 KIF20AO95235 890 aa20.83■□□□□ 0.93
RFTN1-201ENST00000334133 FOSP01100 380 aaPredicted RBP20.83■□□□□ 0.93
RFTN1-201ENST00000334133 SPDYE6P0CI01 402 aa20.83■□□□□ 0.93
RFTN1-201ENST00000334133 FRMD3A2A2Y4 597 aa20.83■□□□□ 0.92
RFTN1-201ENST00000334133 FTCDO95954 541 aa20.83■□□□□ 0.92
RFTN1-201ENST00000334133 FKBP1AP62942 108 aaKnown RBP20.83■□□□□ 0.92
RFTN1-201ENST00000334133 DLGAP5Q15398 846 aa20.83■□□□□ 0.92
RFTN1-201ENST00000334133 GJB7Q6PEY0 223 aa20.83■□□□□ 0.92
RFTN1-201ENST00000334133 ZNF70Q9UC06 446 aaPredicted RBP20.83■□□□□ 0.92
RFTN1-201ENST00000334133 ARMCX3Q9UH62 379 aaPredicted RBP20.83■□□□□ 0.92
RFTN1-201ENST00000334133 IGLV3-22A0A075B6J6 115 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 TBCAO75347 108 aaKnown RBP20.82■□□□□ 0.92
RFTN1-201ENST00000334133 DGKZQ13574 1117 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 PLS1Q14651 629 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 LRCH2Q5VUJ6 765 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 MOXD1Q6UVY6 613 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 MAEAQ7L5Y9 396 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 FAM20AQ96MK3 541 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 OSBPL9Q96SU4 736 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 CKAP4Q07065 602 aaKnown RBP20.82■□□□□ 0.92
RFTN1-201ENST00000334133 KLHL30Q0D2K2 578 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 LARGE2Q8N3Y3 721 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 GOLPH3Q9H4A6 298 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 ARHGEF10LQ9HCE6 1279 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 ZBTB21Q9ULJ3 1066 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 ATRNL1Q5VV63 1379 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 ANO9A1A5B4 782 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 COG2Q14746 738 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 IQCDQ96DY2 449 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 FAN1Q9Y2M0 1017 aa20.82■□□□□ 0.92
RFTN1-201ENST00000334133 PITPNM2Q9BZ72 1349 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 LCA5LO95447 670 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 KLRC1P26715 233 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 MYCT1Q8N699 235 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 ALS2CR12Q96Q35 445 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 LRRC1Q9BTT6 524 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.81■□□□□ 0.92
RFTN1-201ENST00000334133 WRAP73Q9P2S5 460 aaPredicted RBP20.81■□□□□ 0.92
RFTN1-201ENST00000334133 TBX3O15119 743 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 SERPING1P05155 500 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 ARP10275 920 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 FAM193AP78312 1265 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 RINT1Q6NUQ1 792 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 BTNL9Q6UXG8 535 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 RIN2Q8WYP3 895 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms