RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CIAO1O76071 339 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 THPOP40225 353 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 CCR3P51677 355 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 ERVFC1P60507 584 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 ZBTB41Q5SVQ8 909 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 G2E3Q7L622 706 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 MRPS27Q92552 414 aaKnown RBP7.92□□□□□ -1.14
CSTF3-201ENST00000323959 SFXN1Q9H9B4 322 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 ANKMY1Q9P2S6 941 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 HDAC6Q9UBN7 1215 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 DSPP15924 2871 aaKnown RBP7.92□□□□□ -1.14
CSTF3-201ENST00000323959 HAS3O00219 553 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 PTPN14Q15678 1187 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 PLPP4Q5VZY2 271 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 LONP2Q86WA8 852 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 LRRC47Q8N1G4 583 aaKnown RBP7.92□□□□□ -1.14
CSTF3-201ENST00000323959 PRPF38AQ8NAV1 312 aaKnown RBP7.92□□□□□ -1.14
CSTF3-201ENST00000323959 C8orf58Q8NAV2 365 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 STAMQ92783 540 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 SMC4Q9NTJ3 1288 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 RAI14Q9P0K7 980 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 CDH22Q9UJ99 828 aa7.92□□□□□ -1.14
CSTF3-201ENST00000323959 MRPS17Q9Y2R5 130 aaKnown RBP7.92□□□□□ -1.14
CSTF3-201ENST00000323959 NRCAMQ92823 1304 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 LCTP09848 1927 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 TTC3P53804 2025 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 FAM170BA6NMN3 283 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 CLASP2O75122 1294 aaKnown RBP7.91□□□□□ -1.14
CSTF3-201ENST00000323959 LRRN2O75325 713 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 FGF18O76093 207 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 PAPSS2O95340 614 aaPredicted RBP7.91□□□□□ -1.14
CSTF3-201ENST00000323959 FKBP5Q13451 457 aaPredicted RBP7.91□□□□□ -1.14
CSTF3-201ENST00000323959 SMC1AQ14683 1233 aaKnown RBP7.91□□□□□ -1.14
CSTF3-201ENST00000323959 ZNF423Q2M1K9 1284 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 SCFD2Q8WU76 684 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 KAT2BQ92831 832 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 WNT8BQ93098 351 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 SLC32A1Q9H598 525 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 ZBTB40Q9NUA8 1239 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 COG6Q9Y2V7 657 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 SHROOM3Q8TF72 1996 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 CASTP20810 708 aaKnown RBP7.91□□□□□ -1.14
CSTF3-201ENST00000323959 ICA1Q05084 483 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 GABPAQ06546 454 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 ATG9AQ7Z3C6 839 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 SPICE1Q8N0Z3 855 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 KAZALD1Q96I82 304 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 MPHOSPH6Q99547 160 aaKnown RBP7.91□□□□□ -1.14
CSTF3-201ENST00000323959 PRORYQ9H606 182 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 SLC38A10Q9HBR0 1119 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 ENTPD7Q9NQZ7 604 aa7.91□□□□□ -1.14
CSTF3-201ENST00000323959 ADD3Q9UEY8 706 aaKnown RBP7.91□□□□□ -1.14
CSTF3-201ENST00000323959 MYH8P13535 1937 aa7.9□□□□□ -1.14
CSTF3-201ENST00000323959 ANHXE9PGG2 379 aa7.9□□□□□ -1.14
CSTF3-201ENST00000323959 NCLP19338 710 aaKnown RBP7.9□□□□□ -1.14
CSTF3-201ENST00000323959 UBXN2BQ14CS0 331 aa7.9□□□□□ -1.14
CSTF3-201ENST00000323959 TSSK4Q6SA08 328 aa7.9□□□□□ -1.14
CSTF3-201ENST00000323959 RAB44Q7Z6P3 723 aaPredicted RBP7.9□□□□□ -1.14
CSTF3-201ENST00000323959 ANKRD44Q8N8A2 993 aa7.9□□□□□ -1.14
CSTF3-201ENST00000323959 CMASQ8NFW8 434 aaPredicted RBP7.9□□□□□ -1.14
CSTF3-201ENST00000323959 GLG1Q92896 1179 aa7.9□□□□□ -1.14
CSTF3-201ENST00000323959 EDEM2Q9BV94 578 aa7.9□□□□□ -1.14
CSTF3-201ENST00000323959 USP26Q9BXU7 913 aa7.9□□□□□ -1.14
CSTF3-201ENST00000323959 CHRDQ9H2X0 955 aa7.9□□□□□ -1.14
CSTF3-201ENST00000323959 A1CFQ9NQ94 594 aaKnown RBP7.9□□□□□ -1.14
CSTF3-201ENST00000323959 AATFQ9NY61 560 aaKnown RBP eCLIP7.9□□□□□ -1.14
CSTF3-201ENST00000323959 NOB1Q9ULX3 412 aaKnown RBP7.9□□□□□ -1.14
CSTF3-201ENST00000323959 RAXQ9Y2V3 346 aa7.9□□□□□ -1.14
CSTF3-201ENST00000323959 DOPEY1Q5JWR5 2465 aa7.9□□□□□ -1.14
CSTF3-201ENST00000323959 MPHOSPH10O00566 681 aaKnown RBP7.9□□□□□ -1.15
CSTF3-201ENST00000323959 ENPP3O14638 875 aa7.9□□□□□ -1.15
CSTF3-201ENST00000323959 FGD1P98174 961 aa7.9□□□□□ -1.15
CSTF3-201ENST00000323959 PFKPQ01813 784 aa7.9□□□□□ -1.15
CSTF3-201ENST00000323959 NAA16Q6N069 864 aaPredicted RBP7.9□□□□□ -1.15
CSTF3-201ENST00000323959 KIAA1211LQ6NV74 962 aa7.9□□□□□ -1.15
CSTF3-201ENST00000323959 TMED8Q6PL24 325 aaPredicted RBP7.9□□□□□ -1.15
CSTF3-201ENST00000323959 CEP126Q9P2H0 1117 aa7.9□□□□□ -1.15
CSTF3-201ENST00000323959 SWAP70Q9UH65 585 aa7.9□□□□□ -1.15
CSTF3-201ENST00000323959 UPK3BL1B0FP48 263 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 UPK3BL2E5RIL1 263 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 RLBP1P12271 317 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 LAG3P18627 525 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 BMS1Q14692 1282 aaKnown RBP7.89□□□□□ -1.15
CSTF3-201ENST00000323959 MFSD10Q14728 455 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 C15orf39Q6ZRI6 1047 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 CEP68Q76N32 757 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 TSPYL6Q8N831 410 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 TCF25Q9BQ70 676 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 ARRDC1-AS1Q9H2J1 176 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 SPTA1P02549 2419 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 TEX51A0A1B0GUA7 166 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 ELL2O00472 640 aaPredicted RBP7.89□□□□□ -1.15
CSTF3-201ENST00000323959 HRO43593 1189 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 RAD21O60216 631 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 AKAP3O75969 853 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 LETM2Q2VYF4 491 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 FNDC1Q4ZHG4 1894 aaPredicted RBP7.89□□□□□ -1.15
CSTF3-201ENST00000323959 SIAH1Q8IUQ4 282 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 COLGALT1Q8NBJ5 622 aa7.89□□□□□ -1.15
CSTF3-201ENST00000323959 PPP1R13LQ8WUF5 828 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms