RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 SIK3Q9Y2K2 1263 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 POTEB3A0JP26 581 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 POTECB2RU33 542 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 FGFR1OPO95684 399 aaKnown RBP15.51■□□□□ 0.07
PABPC1-201ENST00000318607 HIBADHP31937 336 aaKnown RBP15.51■□□□□ 0.07
PABPC1-201ENST00000318607 KCNJ1P48048 391 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 SESN3P58005 492 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 POTEBQ6S5H4 581 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 MTFR1LQ9H019 292 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 COL4A3BPQ9Y5P4 624 aa15.51■□□□□ 0.07
PABPC1-201ENST00000318607 A8MUI8 341 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 CHN1P15882 459 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 TRAPPC10P48553 1259 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 PPP2R2AP63151 447 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 SLC35G1Q2M3R5 365 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 NSMCE1Q8WV22 266 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 YIPF3Q9GZM5 350 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 PKD2L1Q9P0L9 805 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 UTP11Q9Y3A2 253 aaKnown RBP15.5■□□□□ 0.07
PABPC1-201ENST00000318607 QSER1Q2KHR3 1735 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 DIAPH2O60879 1101 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 CPP00450 1065 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 KCNH2Q12809 1159 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 GRIK5Q16478 980 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 CDC37Q16543 378 aaPredicted RBP15.5■□□□□ 0.07
PABPC1-201ENST00000318607 FAM182BQ5T319 152 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 GLYCTKQ8IVS8 523 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 USP38Q8NB14 1042 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 ZNF622Q969S3 477 aaKnown RBP eCLIP15.5■□□□□ 0.07
PABPC1-201ENST00000318607 SPDL1Q96EA4 605 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 AFDNP55196 1824 aaKnown RBP15.5■□□□□ 0.07
PABPC1-201ENST00000318607 WDR17Q8IZU2 1322 aa15.5■□□□□ 0.07
PABPC1-201ENST00000318607 HMGB1P1B2RPK0 211 aaPredicted RBP15.49■□□□□ 0.07
PABPC1-201ENST00000318607 USP17L15C9J2P7 530 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 USP17L13C9JLJ4 530 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 USP17L11C9JVI0 530 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 USP17L18D6R9N7 530 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 USP17L22D6RA61 530 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 USP17L17D6RBQ6 530 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 USP17L19D6RCP7 530 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 USP17L20D6RJB6 530 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 FECHP22830 423 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 USP17L24Q0WX57 530 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 USP17L6PQ6QN14 398 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 LRRC45Q96CN5 670 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 ERGIC2Q96RQ1 377 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 RGS16O15492 202 aaPredicted RBP15.49■□□□□ 0.07
PABPC1-201ENST00000318607 SSR1P43307 286 aaKnown RBP15.49■□□□□ 0.07
PABPC1-201ENST00000318607 UAP1Q16222 522 aaPredicted RBP15.49■□□□□ 0.07
PABPC1-201ENST00000318607 ANKS1AQ92625 1134 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 SH2D3AQ9BRG2 576 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 MXD3Q9BW11 206 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 SAMD15Q9P1V8 674 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 UTRNP46939 3433 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 MYH6P13533 1939 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 UBR2Q8IWV8 1755 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 PNPLA7Q6ZV29 1317 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 FAM196BA6NMK8 535 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 TRIM28Q13263 835 aaKnown RBP15.49■□□□□ 0.07
PABPC1-201ENST00000318607 GRB10Q13322 594 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 KCTD1Q719H9 257 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 BAP1Q92560 729 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 EYA3Q99504 573 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 INTS9Q9NV88 658 aaKnown RBP15.49■□□□□ 0.07
PABPC1-201ENST00000318607 RTCBQ9Y3I0 505 aaKnown RBP15.49■□□□□ 0.07
PABPC1-201ENST00000318607 MYH2Q9UKX2 1941 aa15.49■□□□□ 0.07
PABPC1-201ENST00000318607 GOLGA6L10A0A0M3HER8 536 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 POTEFA5A3E0 1075 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 POTEIP0CG38 1075 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 FKBP3Q00688 224 aaKnown RBP15.48■□□□□ 0.07
PABPC1-201ENST00000318607 KCNB1Q14721 858 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 POTEGQ6S5H5 508 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 POTEEQ6S8J3 1075 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 RUFY4Q6ZNE9 571 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 LRRC34Q8IZ02 419 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 NSUN4Q96CB9 384 aaKnown RBP15.48■□□□□ 0.07
PABPC1-201ENST00000318607 ATP6V0A2Q9Y487 856 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 PGRMC1O00264 195 aaKnown RBP15.48■□□□□ 0.07
PABPC1-201ENST00000318607 SERPING1P05155 500 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 PLCG2P16885 1265 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 CRKLP46109 303 aaKnown RBP15.48■□□□□ 0.07
PABPC1-201ENST00000318607 ECM1Q16610 540 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 TMEM132AQ24JP5 1023 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 LRCH2Q5VUJ6 765 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 CCDC197Q8NCU1 140 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 PRDM16Q9HAZ2 1276 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 STXBP3O00186 592 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 COASYQ13057 564 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 ZNF571Q7Z3V5 609 aaPredicted RBP15.48■□□□□ 0.07
PABPC1-201ENST00000318607 ANKS4BQ8N8V4 417 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 EPS8L3Q8TE67 593 aaKnown RBP15.48■□□□□ 0.07
PABPC1-201ENST00000318607 PSMD1Q99460 953 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 FMO2Q99518 471 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 MMTAG2Q9BU76 263 aaKnown RBP15.48■□□□□ 0.07
PABPC1-201ENST00000318607 TMBIM4Q9HC24 238 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 PCDHA12Q9UN75 941 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 MINPP1Q9UNW1 487 aa15.48■□□□□ 0.07
PABPC1-201ENST00000318607 CYP2J2P51589 502 aa15.47■□□□□ 0.07
PABPC1-201ENST00000318607 RNASELQ05823 741 aaKnown RBP15.47■□□□□ 0.07
PABPC1-201ENST00000318607 KCNA1Q09470 495 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms