RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 PHKBQ93100 1093 aa20.21■□□□□ 0.83
TPM1-203ENST00000317516 SLC26A6Q9BXS9 759 aa20.21■□□□□ 0.83
TPM1-203ENST00000317516 TM6SF1Q9BZW5 370 aa20.21■□□□□ 0.83
TPM1-203ENST00000317516 PPP4R2Q9NY27 417 aa20.21■□□□□ 0.83
TPM1-203ENST00000317516 TRPC6Q9Y210 931 aa20.21■□□□□ 0.83
TPM1-203ENST00000317516 TANC1Q9C0D5 1861 aa20.21■□□□□ 0.83
TPM1-203ENST00000317516 CDH23Q9H251 3354 aa20.2■□□□□ 0.82
TPM1-203ENST00000317516 TET1Q8NFU7 2136 aa20.2■□□□□ 0.82
TPM1-203ENST00000317516 RFXAPO00287 272 aa20.2■□□□□ 0.82
TPM1-203ENST00000317516 INSRRP14616 1297 aa20.2■□□□□ 0.82
TPM1-203ENST00000317516 IGBP1P78318 339 aa20.2■□□□□ 0.82
TPM1-203ENST00000317516 ITGB3BPQ13352 177 aaPredicted RBP20.2■□□□□ 0.82
TPM1-203ENST00000317516 NTRK3Q16288 839 aa20.2■□□□□ 0.82
TPM1-203ENST00000317516 TJAP1Q5JTD0 557 aa20.2■□□□□ 0.82
TPM1-203ENST00000317516 FAM117BQ6P1L5 589 aa20.2■□□□□ 0.82
TPM1-203ENST00000317516 MICALL1Q8N3F8 863 aa20.2■□□□□ 0.82
TPM1-203ENST00000317516 PCYT2Q99447 389 aa20.2■□□□□ 0.82
TPM1-203ENST00000317516 IFIH1Q9BYX4 1025 aaKnown RBP20.2■□□□□ 0.82
TPM1-203ENST00000317516 THEGQ9P2T0 379 aa20.2■□□□□ 0.82
TPM1-203ENST00000317516 FAM86B1E9PN63 330 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 CPLX1O14810 134 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 ATG7O95352 703 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 CHRNA1P02708 482 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 FAM86B2P0C5J1 330 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 SETQ01105 290 aaPredicted RBP20.19■□□□□ 0.82
TPM1-203ENST00000317516 IER5Q5VY09 327 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 FAM160B1Q5W0V3 765 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 CPLX2Q6PUV4 134 aaKnown RBP20.19■□□□□ 0.82
TPM1-203ENST00000317516 RUFY4Q6ZNE9 571 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 DNAJB3Q8WWF6 145 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 ZNF274Q96GC6 653 aaPredicted RBP20.19■□□□□ 0.82
TPM1-203ENST00000317516 TGS1Q96RS0 853 aaKnown RBP20.19■□□□□ 0.82
TPM1-203ENST00000317516 SH3GLB2Q9NR46 395 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 TBC1D22BQ9NU19 505 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 TCEAL9Q9UHQ7 104 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 MTCH2Q9Y6C9 303 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 CUL9Q8IWT3 2517 aa20.19■□□□□ 0.82
TPM1-203ENST00000317516 POTEB3A0JP26 581 aa20.18■□□□□ 0.82
TPM1-203ENST00000317516 LCHNA4D1U4 455 aa20.18■□□□□ 0.82
TPM1-203ENST00000317516 IPO5O00410 1097 aaKnown RBP20.18■□□□□ 0.82
TPM1-203ENST00000317516 BACH1O14867 736 aa20.18■□□□□ 0.82
TPM1-203ENST00000317516 ARHGEF15O94989 841 aa20.18■□□□□ 0.82
TPM1-203ENST00000317516 SSRP1Q08945 709 aaKnown RBP20.18■□□□□ 0.82
TPM1-203ENST00000317516 MKRN4PQ13434 485 aaPredicted RBP20.18■□□□□ 0.82
TPM1-203ENST00000317516 MARCH8Q5T0T0 291 aa20.18■□□□□ 0.82
TPM1-203ENST00000317516 MIS18BP1Q6P0N0 1132 aa20.18■□□□□ 0.82
TPM1-203ENST00000317516 POTEBQ6S5H4 581 aa20.18■□□□□ 0.82
TPM1-203ENST00000317516 CRYGNQ8WXF5 182 aa20.18■□□□□ 0.82
TPM1-203ENST00000317516 TOP1MTQ969P6 601 aa20.18■□□□□ 0.82
TPM1-203ENST00000317516 ZNF577Q9BSK1 485 aa20.18■□□□□ 0.82
TPM1-203ENST00000317516 NCOA5Q9HCD5 579 aaKnown RBP20.18■□□□□ 0.82
TPM1-203ENST00000317516 CHD9Q3L8U1 2897 aa20.18■□□□□ 0.82
TPM1-203ENST00000317516 M0QZ92 97 aa20.17■□□□□ 0.82
TPM1-203ENST00000317516 DDX39AO00148 427 aaKnown RBP20.17■□□□□ 0.82
TPM1-203ENST00000317516 NLRP5P59047 1200 aa20.17■□□□□ 0.82
TPM1-203ENST00000317516 ERVK-21P61565 698 aa20.17■□□□□ 0.82
TPM1-203ENST00000317516 MRPS5P82675 430 aaKnown RBP20.17■□□□□ 0.82
TPM1-203ENST00000317516 TOB2Q14106 344 aaPredicted RBP20.17■□□□□ 0.82
TPM1-203ENST00000317516 PLCB4Q15147 1175 aa20.17■□□□□ 0.82
TPM1-203ENST00000317516 SKIV2LQ15477 1246 aaKnown RBP20.17■□□□□ 0.82
TPM1-203ENST00000317516 PRDM6Q9NQX0 595 aa20.17■□□□□ 0.82
TPM1-203ENST00000317516 PDRG1Q9NUG6 133 aa20.17■□□□□ 0.82
TPM1-203ENST00000317516 LMCD1Q9NZU5 365 aa20.17■□□□□ 0.82
TPM1-203ENST00000317516 PCDHA2Q9Y5H9 948 aa20.17■□□□□ 0.82
TPM1-203ENST00000317516 IGLV3-22A0A075B6J6 115 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 IGKV6D-21A0A0A0MT36 114 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 LINC01553A4QN01 128 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 EPOPA6NHQ4 379 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 HBP1O60381 514 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 PPFIA3O75145 1194 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 GHRP10912 638 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 CIITAP33076 1130 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 HTRA4P83105 476 aaPredicted RBP20.16■□□□□ 0.82
TPM1-203ENST00000317516 GRB10Q13322 594 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 ABHD15Q6UXT9 468 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 NME8Q8N427 588 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 IL27Q8NEV9 243 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 ASB2Q96Q27 587 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 YME1L1Q96TA2 773 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 C22orf23Q9BZE7 217 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 UPF3BQ9BZI7 483 aaKnown RBP20.16■□□□□ 0.82
TPM1-203ENST00000317516 ZNF302Q9NR11 478 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 VPS54Q9P1Q0 977 aa20.16■□□□□ 0.82
TPM1-203ENST00000317516 DHX15O43143 795 aaKnown RBP20.15■□□□□ 0.82
TPM1-203ENST00000317516 UPP2O95045 317 aa20.15■□□□□ 0.82
TPM1-203ENST00000317516 CCNE2O96020 404 aa20.15■□□□□ 0.82
TPM1-203ENST00000317516 USP11P51784 963 aa20.15■□□□□ 0.82
TPM1-203ENST00000317516 MRPS6P82932 125 aaKnown RBP20.15■□□□□ 0.82
TPM1-203ENST00000317516 MGAT3Q09327 533 aa20.15■□□□□ 0.82
TPM1-203ENST00000317516 AAK1Q2M2I8 961 aa20.15■□□□□ 0.82
TPM1-203ENST00000317516 PRR16Q569H4 304 aa20.15■□□□□ 0.82
TPM1-203ENST00000317516 ZNF746Q6NUN9 644 aaPredicted RBP20.15■□□□□ 0.82
TPM1-203ENST00000317516 PDXDC2PQ6P474 469 aa20.15■□□□□ 0.82
TPM1-203ENST00000317516 OSBPL7Q9BZF2 842 aa20.15■□□□□ 0.82
TPM1-203ENST00000317516 FAM49AQ9H0Q0 323 aaPredicted RBP20.15■□□□□ 0.82
TPM1-203ENST00000317516 CDY2AQ9Y6F7 541 aa20.15■□□□□ 0.82
TPM1-203ENST00000317516 SQORQ9Y6N5 450 aa20.15■□□□□ 0.82
TPM1-203ENST00000317516 UNC80Q8N2C7 3258 aa20.14■□□□□ 0.82
TPM1-203ENST00000317516 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.14■□□□□ 0.81
TPM1-203ENST00000317516 EIF5BO60841 1220 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms