RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 EDEM3Q9BZQ6 932 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 FAM153AQ9UHL3 310 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 GOLGA6CA6NDK9 693 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 RBAK-RBAKDNI3L0D1 243 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 CETN3O15182 167 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 CLIC2O15247 247 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 TRIM37O94972 964 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 GOLGA6DP0CG33 693 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 POLD1P28340 1107 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 NAB2Q15742 525 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 MEX3CQ5U5Q3 659 aaKnown RBP27.86■■■□□ 2.05
HOXB3-201ENST00000311626 GOLGA6AQ9NYA3 693 aa27.86■■■□□ 2.05
HOXB3-201ENST00000311626 SPATA31C1P0DKV0 1188 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 SPIRE1Q08AE8 756 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 SLC18A3Q16572 532 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 TCERG1LQ5VWI1 586 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 ETNPPLQ8TBG4 499 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 NFU1Q9UMS0 254 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 CASP4P49662 377 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 JAG1P78504 1218 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 PTK2Q05397 1052 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 CFAP221Q4G0U5 840 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 GJB7Q6PEY0 223 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 SRLQ86TD4 932 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 SPICE1Q8N0Z3 855 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 ARL8AQ96BM9 186 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 KRT12Q99456 494 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 RGL1Q9NZL6 768 aa27.85■■■□□ 2.05
HOXB3-201ENST00000311626 AJAP1Q9UKB5 411 aaPredicted RBP27.85■■■□□ 2.05
HOXB3-201ENST00000311626 USP11P51784 963 aa27.84■■■□□ 2.05
HOXB3-201ENST00000311626 GUCY2DQ02846 1103 aa27.84■■■□□ 2.05
HOXB3-201ENST00000311626 EPB41L5Q9HCM4 733 aa27.84■■■□□ 2.05
HOXB3-201ENST00000311626 ZNF571Q7Z3V5 609 aaPredicted RBP27.84■■■□□ 2.05
HOXB3-201ENST00000311626 RNF10Q8N5U6 811 aaKnown RBP27.84■■■□□ 2.05
HOXB3-201ENST00000311626 THSD7AQ9UPZ6 1657 aa27.83■■■□□ 2.05
HOXB3-201ENST00000311626 GUCY2FP51841 1108 aa27.83■■■□□ 2.05
HOXB3-201ENST00000311626 FAM76AQ8TAV0 307 aa27.83■■■□□ 2.05
HOXB3-201ENST00000311626 FAM198AQ9UFP1 575 aa27.83■■■□□ 2.05
HOXB3-201ENST00000311626 UBR3Q6ZT12 1888 aa27.83■■■□□ 2.05
HOXB3-201ENST00000311626 GRID2IPA4D2P6 1211 aa27.83■■■□□ 2.05
HOXB3-201ENST00000311626 F5H6K3 240 aa27.83■■■□□ 2.05
HOXB3-201ENST00000311626 GNA14O95837 355 aa27.83■■■□□ 2.05
HOXB3-201ENST00000311626 KLRC3Q07444 240 aa27.83■■■□□ 2.05
HOXB3-201ENST00000311626 BHMT2Q9H2M3 363 aa27.83■■■□□ 2.05
HOXB3-201ENST00000311626 DNM3Q9UQ16 869 aa27.83■■■□□ 2.05
HOXB3-201ENST00000311626 KLRG2A4D1S0 409 aaPredicted RBP27.82■■■□□ 2.04
HOXB3-201ENST00000311626 ZBTB39O15060 712 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 PPARDQ03181 441 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 ICA1Q05084 483 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 HHIPL2Q6UWX4 724 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 KSR1Q8IVT5 923 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 KLHL7Q8IXQ5 586 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 LENG9Q96B70 501 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 RUSC1Q9BVN2 902 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 AKAP3O75969 853 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 HEXIM1O94992 359 aaKnown RBP27.82■■■□□ 2.04
HOXB3-201ENST00000311626 IVLP07476 585 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 ITIH3Q06033 890 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 PIGOQ8TEQ8 1089 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 SPAG5Q96R06 1193 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 SUGT1Q9Y2Z0 365 aa27.82■■■□□ 2.04
HOXB3-201ENST00000311626 EML1O00423 815 aa27.81■■■□□ 2.04
HOXB3-201ENST00000311626 KCTD16Q68DU8 428 aa27.81■■■□□ 2.04
HOXB3-201ENST00000311626 SAMD1Q6SPF0 538 aaPredicted RBP27.81■■■□□ 2.04
HOXB3-201ENST00000311626 SYN2Q92777 582 aaPredicted RBP27.81■■■□□ 2.04
HOXB3-201ENST00000311626 TMEM51Q9NW97 253 aa27.81■■■□□ 2.04
HOXB3-201ENST00000311626 ARMCX3Q9UH62 379 aaPredicted RBP27.81■■■□□ 2.04
HOXB3-201ENST00000311626 NOP2P46087 812 aaKnown RBP27.81■■■□□ 2.04
HOXB3-201ENST00000311626 IRF2BP2Q7Z5L9 587 aa27.81■■■□□ 2.04
HOXB3-201ENST00000311626 SH2D3CQ8N5H7 860 aa27.81■■■□□ 2.04
HOXB3-201ENST00000311626 RBM46Q8TBY0 533 aaKnown RBP27.81■■■□□ 2.04
HOXB3-201ENST00000311626 CYP3A7-CYP3A51PA0A087WV96 503 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 FRMD3A2A2Y4 597 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 CYP3A7P24462 503 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 EPHB4P54760 987 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 MARSP56192 900 aaKnown RBP27.8■■■□□ 2.04
HOXB3-201ENST00000311626 KNOP1Q1ED39 458 aaKnown RBP27.8■■■□□ 2.04
HOXB3-201ENST00000311626 MEI1Q5TIA1 1274 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 SLFN12Q8IYM2 578 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 CCDC17Q96LX7 622 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 NUCKS1Q9H1E3 243 aaKnown RBP27.8■■■□□ 2.04
HOXB3-201ENST00000311626 AIPL1Q9NZN9 384 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 MSH4O15457 936 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 UCHL3P15374 230 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 UBXN2AP68543 259 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 DPY19L2P1Q6NXN4 242 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 ZNF622Q969S3 477 aaKnown RBP eCLIP27.8■■■□□ 2.04
HOXB3-201ENST00000311626 PCDHB13Q9Y5F0 798 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 SMCHD1A6NHR9 2005 aa27.8■■■□□ 2.04
HOXB3-201ENST00000311626 CHMP2AO43633 222 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 RPS6KA5O75582 802 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 NDUFB10O96000 172 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 PON1P27169 355 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 CTTNQ14247 550 aaKnown RBP27.79■■■□□ 2.04
HOXB3-201ENST00000311626 TTMPQ5BVD1 217 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 FBXO11Q86XK2 927 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 AMNQ9BXJ7 453 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 MYO3BQ8WXR4 1341 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 LTBP1Q14766 1721 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 SPDYE3A6NKU9 549 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms