RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 CHN1P15882 459 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 SLC9A1P19634 815 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 PDE6BP35913 854 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 XRCC4Q13426 336 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 FAM26FQ5R3K3 315 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 AGBL2Q5U5Z8 902 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 GALNT17Q6IS24 598 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 ALKBH5Q6P6C2 394 aaKnown RBP16.03■□□□□ 0.16
COL6A2-202ENST00000310645 ZNF571Q7Z3V5 609 aaPredicted RBP16.03■□□□□ 0.16
COL6A2-202ENST00000310645 PBKQ96KB5 322 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 MMEP08473 750 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 GNA11P29992 359 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 IL6STP40189 918 aaPredicted RBP16.03■□□□□ 0.16
COL6A2-202ENST00000310645 COASYQ13057 564 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 REXO1Q8N1G1 1221 aaKnown RBP16.03■□□□□ 0.16
COL6A2-202ENST00000310645 DAGLBQ8NCG7 672 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 CCDC26Q8TAB7 109 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 RAD54LQ92698 747 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 RIC8AQ9NPQ8 531 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 PANK4Q9NVE7 773 aa16.03■□□□□ 0.16
COL6A2-202ENST00000310645 SEC63Q9UGP8 760 aaKnown RBP16.03■□□□□ 0.16
COL6A2-202ENST00000310645 UTP11Q9Y3A2 253 aaKnown RBP16.03■□□□□ 0.16
COL6A2-202ENST00000310645 NPHP3-ACAD11A0A0J9YXS1 232 aa16.02■□□□□ 0.16
COL6A2-202ENST00000310645 F8VZ95 297 aa16.02■□□□□ 0.16
COL6A2-202ENST00000310645 SHBGP04278 402 aa16.02■□□□□ 0.16
COL6A2-202ENST00000310645 ANKS4BQ8N8V4 417 aa16.02■□□□□ 0.16
COL6A2-202ENST00000310645 PIGSQ96S52 555 aa16.02■□□□□ 0.16
COL6A2-202ENST00000310645 ZMYND12Q9H0C1 365 aa16.02■□□□□ 0.16
COL6A2-202ENST00000310645 ZNF804BA4D1E1 1349 aa16.02■□□□□ 0.15
COL6A2-202ENST00000310645 TCERG1LQ5VWI1 586 aa16.02■□□□□ 0.15
COL6A2-202ENST00000310645 BICDL1Q6ZP65 573 aa16.02■□□□□ 0.15
COL6A2-202ENST00000310645 DZIP1Q86YF9 867 aaKnown RBP16.02■□□□□ 0.15
COL6A2-202ENST00000310645 NSMCE1Q8WV22 266 aa16.02■□□□□ 0.15
COL6A2-202ENST00000310645 RSRC1Q96IZ7 334 aaKnown RBP16.02■□□□□ 0.15
COL6A2-202ENST00000310645 SWAP70Q9UH65 585 aa16.02■□□□□ 0.15
COL6A2-202ENST00000310645 NR2E1Q9Y466 385 aa16.02■□□□□ 0.15
COL6A2-202ENST00000310645 CD2APQ9Y5K6 639 aa16.02■□□□□ 0.15
COL6A2-202ENST00000310645 CICQ96RK0 1608 aaPredicted RBP16.02■□□□□ 0.15
COL6A2-202ENST00000310645 MYH7BA7E2Y1 1941 aa16.02■□□□□ 0.15
COL6A2-202ENST00000310645 SLCO1A2P46721 670 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 ADAM9Q13443 819 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 HERC4Q5GLZ8 1057 aaPredicted RBP16.01■□□□□ 0.15
COL6A2-202ENST00000310645 C3orf67Q6ZVT6 689 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 TRIM6Q9C030 488 aaPredicted RBP16.01■□□□□ 0.15
COL6A2-202ENST00000310645 STK17AQ9UEE5 414 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 C5orf60A6NFR6 353 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 CLSTN1O94985 981 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 FGGP02679 453 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 MRPL12P52815 198 aaKnown RBP16.01■□□□□ 0.15
COL6A2-202ENST00000310645 KCNH2Q12809 1159 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 SYN2Q92777 582 aaPredicted RBP16.01■□□□□ 0.15
COL6A2-202ENST00000310645 CUL5Q93034 780 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 COA7Q96BR5 231 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 ABCB11O95342 1321 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 MGRN1O60291 552 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 TNNI2P48788 182 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 ECM1Q16610 540 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 LACTB2Q53H82 288 aaPredicted RBP16.01■□□□□ 0.15
COL6A2-202ENST00000310645 LRCH2Q5VUJ6 765 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 NAIF1Q69YI7 327 aaPredicted RBP16.01■□□□□ 0.15
COL6A2-202ENST00000310645 TAX1BP1Q86VP1 789 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 LRRC34Q8IZ02 419 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 C3orf20Q8ND61 904 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 ACTRT1Q8TDG2 376 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.01■□□□□ 0.152e-6■■■■■ 76.2
COL6A2-202ENST00000310645 FMO2Q99518 471 aa16.01■□□□□ 0.15
COL6A2-202ENST00000310645 SPDYE3A6NKU9 549 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 KRT18P05783 430 aaKnown RBP16■□□□□ 0.15
COL6A2-202ENST00000310645 PLTPP55058 493 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 UBE4AQ14139 1066 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 CRYMQ14894 314 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 COBLL1Q53SF7 1204 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 FAXDC2Q96IV6 333 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 KDM4CQ9H3R0 1056 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 ATP6V0A4Q9HBG4 840 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 CCDC189A1A4V9 331 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 PPIP5K2O43314 1243 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 IFI16Q16666 785 aaKnown RBP16■□□□□ 0.15
COL6A2-202ENST00000310645 DCAF17Q5H9S7 520 aaPredicted RBP16■□□□□ 0.15
COL6A2-202ENST00000310645 ARMC9Q7Z3E5 817 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 TPCN2Q8NHX9 752 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 U2AF1L4Q8WU68 220 aaKnown RBP16■□□□□ 0.15
COL6A2-202ENST00000310645 GLG1Q92896 1179 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 MTFR1LQ9H019 292 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 BMP2KQ9NSY1 1161 aaPredicted RBP16■□□□□ 0.15
COL6A2-202ENST00000310645 NAGPAQ9UK23 515 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 MINPP1Q9UNW1 487 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 ERMARDQ5T6L9 678 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 FAM129AQ9BZQ8 928 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16■□□□□ 0.15
COL6A2-202ENST00000310645 SAMD15Q9P1V8 674 aa16■□□□□ 0.15
COL6A2-202ENST00000310645 MYH1P12882 1939 aa15.99■□□□□ 0.15
COL6A2-202ENST00000310645 MYH4Q9Y623 1939 aa15.99■□□□□ 0.15
COL6A2-202ENST00000310645 PALM3A6NDB9 673 aaPredicted RBP15.99■□□□□ 0.15
COL6A2-202ENST00000310645 EIF4E1BA6NMX2 242 aaKnown RBP15.99■□□□□ 0.15
COL6A2-202ENST00000310645 E9PMD0 336 aa15.99■□□□□ 0.15
COL6A2-202ENST00000310645 IFI35P80217 286 aaPredicted RBP15.99■□□□□ 0.15
COL6A2-202ENST00000310645 TRIM59Q8IWR1 403 aa15.99■□□□□ 0.15
COL6A2-202ENST00000310645 PRMT1Q99873 361 aaKnown RBP15.99■□□□□ 0.15
COL6A2-202ENST00000310645 RAB34Q9BZG1 259 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms