RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 RIC8AQ9NPQ8 531 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 ZNHIT6Q9NWK9 470 aaKnown RBP11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 ASNSP08243 561 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 PRLRP16471 622 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 TXKP42681 527 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 STAT2P52630 851 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 ZBED6P86452 979 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 IQCDQ96DY2 449 aa11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 MAGEC2Q9UBF1 373 aaPredicted RBP11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 COL2A1P02458 1487 aaPredicted RBP11.37□□□□□ -0.59
APOBEC3F-201ENST00000308521 ESYT2A0FGR8 921 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 A6NNZ2 444 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 GOLGA8KD6RF30 607 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 CLSTN1O94985 981 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 IPO7O95373 1038 aaKnown RBP11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 ELF1P32519 619 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 CRYMQ14894 314 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 PPP2R5AQ15172 486 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 TUBB8Q3ZCM7 444 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 FIGNQ5HY92 759 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 ILDR2Q71H61 639 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 FBXO11Q86XK2 927 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 RASSF8Q8NHQ8 419 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 CAGE1Q8TC20 777 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 ITFG2Q969R8 447 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 DHTKD1Q96HY7 919 aaPredicted RBP11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 VCPKMTQ9H867 229 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 GOPCQ9HD26 462 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 A0A1W2PQJ5 194 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 GOLGA6CA6NDK9 693 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 PDE2AO00408 941 aaPredicted RBP11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 RHOBTB3O94955 611 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 GOLGA6DP0CG33 693 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 STAT6P42226 847 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 IRAK1P51617 712 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 VAV2P52735 878 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 MRPL12P52815 198 aaKnown RBP11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 GPC2Q8N158 579 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 CAPZA3Q96KX2 299 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 SH3GL2Q99962 352 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 AMNQ9BXJ7 453 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 NHEJ1Q9H9Q4 299 aaPredicted RBP11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 EXOC1Q9NV70 894 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 GOLGA6AQ9NYA3 693 aa11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 POLR2AP24928 1970 aaKnown RBP11.36□□□□□ -0.59
APOBEC3F-201ENST00000308521 GOLGA6BA6NDN3 693 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 PSMA7O14818 248 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 IRF6O14896 467 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 KLRC4O43908 158 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 MYBL2P10244 700 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 EPB41P11171 864 aaKnown RBP11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 GCFC2P16383 781 aaKnown RBP11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 MAP3K10Q02779 954 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 TTI2Q6NXR4 508 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 PRPF38AQ8NAV1 312 aaKnown RBP11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 GIMAP8Q8ND71 665 aaPredicted RBP11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 LACRTQ9GZZ8 138 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 DISC1Q9NRI5 854 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 SH3BP1Q9Y3L3 701 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 TRIM49BA6NDI0 452 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 RCCD1A6NED2 376 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 RASSF10A6NK89 507 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 hCG_1984214I3L0E3 225 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 MEIS2O14770 477 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 IDEP14735 1019 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 PMS1P54277 932 aaKnown RBP11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 SPATS2Q86XZ4 545 aaKnown RBP11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 ZNF713Q8N859 430 aaPredicted RBP11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 TRIM58Q8NG06 486 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 RIN2Q8WYP3 895 aaPredicted RBP11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 CABS1Q96KC9 395 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 WRNIP1Q96S55 665 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 SNX12Q9UMY4 172 aa11.35□□□□□ -0.59
APOBEC3F-201ENST00000308521 OPLAHO14841 1288 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 OPA1O60313 960 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 OR52Z1P0C646 297 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 TNFRSF8P28908 595 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 PPP1R2P41236 205 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 CLK2P49760 499 aaKnown RBP11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 KIF5AQ12840 1032 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 SPP2Q13103 211 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 C9orf131Q5VYM1 1079 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 ALS2CLQ60I27 953 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 CREG2Q8IUH2 290 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 FAM114A1Q8IWE2 563 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 LRRC15Q8TF66 581 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 FAXDC2Q96IV6 333 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 TUBGCP2Q9BSJ2 902 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 MAGEF1Q9HAY2 307 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 MCM8Q9UJA3 840 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 MAPK8IP1Q9UQF2 711 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 CHUKO15111 745 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 CFBP00751 764 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 HNRNPH3P31942 346 aaKnown RBP11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 UBA7P41226 1012 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 UBXN2AP68543 259 aa11.34□□□□□ -0.59
APOBEC3F-201ENST00000308521 MTMR2Q13614 643 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms