RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 EPHA7Q15375 998 aa24.9■■□□□ 1.58
PDLIM2-202ENST00000308354 SAMD3Q8N6K7 520 aa24.9■■□□□ 1.58
PDLIM2-202ENST00000308354 GLTPD2A6NH11 291 aa24.89■■□□□ 1.58
PDLIM2-202ENST00000308354 MTF1Q14872 753 aa24.89■■□□□ 1.58
PDLIM2-202ENST00000308354 RINT1Q6NUQ1 792 aa24.89■■□□□ 1.58
PDLIM2-202ENST00000308354 NIPA1Q7RTP0 329 aa24.89■■□□□ 1.58
PDLIM2-202ENST00000308354 MIER3Q7Z3K6 550 aa24.89■■□□□ 1.58
PDLIM2-202ENST00000308354 SFR1Q86XK3 245 aa24.89■■□□□ 1.58
PDLIM2-202ENST00000308354 A1CFQ9NQ94 594 aaKnown RBP24.89■■□□□ 1.58
PDLIM2-202ENST00000308354 SAMM50Q9Y512 469 aa24.89■■□□□ 1.58
PDLIM2-202ENST00000308354 RBBP6Q7Z6E9 1792 aaKnown RBP24.89■■□□□ 1.58
PDLIM2-202ENST00000308354 SOWAHDA6NJG2 315 aa24.89■■□□□ 1.57
PDLIM2-202ENST00000308354 ATP2A1O14983 1001 aa24.89■■□□□ 1.57
PDLIM2-202ENST00000308354 NF2P35240 595 aa24.89■■□□□ 1.57
PDLIM2-202ENST00000308354 MTIF2P46199 727 aaKnown RBP24.89■■□□□ 1.57
PDLIM2-202ENST00000308354 ILDR2Q71H61 639 aa24.89■■□□□ 1.57
PDLIM2-202ENST00000308354 SCFD1Q8WVM8 642 aa24.89■■□□□ 1.57
PDLIM2-202ENST00000308354 DESI2Q9BSY9 194 aa24.89■■□□□ 1.57
PDLIM2-202ENST00000308354 ACAD9Q9H845 621 aa24.89■■□□□ 1.57
PDLIM2-202ENST00000308354 NR3C2P08235 984 aa24.88■■□□□ 1.57
PDLIM2-202ENST00000308354 ANKRD13AQ8IZ07 590 aa24.88■■□□□ 1.57
PDLIM2-202ENST00000308354 CYP39A1Q9NYL5 469 aa24.88■■□□□ 1.57
PDLIM2-202ENST00000308354 LGALS16A8MUM7 142 aa24.88■■□□□ 1.57
PDLIM2-202ENST00000308354 ETF1P62495 437 aaKnown RBP24.88■■□□□ 1.57
PDLIM2-202ENST00000308354 MB21D1Q8N884 522 aa24.88■■□□□ 1.57
PDLIM2-202ENST00000308354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.88■■□□□ 1.57
PDLIM2-202ENST00000308354 RNF225M0QZC1 329 aaPredicted RBP24.87■■□□□ 1.57
PDLIM2-202ENST00000308354 LRRC63Q05C16 580 aa24.87■■□□□ 1.57
PDLIM2-202ENST00000308354 TRIM65Q6PJ69 517 aa24.87■■□□□ 1.57
PDLIM2-202ENST00000308354 TRMT1LQ7Z2T5 733 aaKnown RBP24.87■■□□□ 1.57
PDLIM2-202ENST00000308354 CNGA4Q8IV77 575 aa24.87■■□□□ 1.57
PDLIM2-202ENST00000308354 FAM114A1Q8IWE2 563 aa24.87■■□□□ 1.57
PDLIM2-202ENST00000308354 ZC3H15Q8WU90 426 aaKnown RBP24.87■■□□□ 1.57
PDLIM2-202ENST00000308354 TAF1DQ9H5J8 278 aaPredicted RBP24.87■■□□□ 1.57
PDLIM2-202ENST00000308354 BTBD7Q9P203 1132 aa24.87■■□□□ 1.57
PDLIM2-202ENST00000308354 PPATQ06203 517 aa24.86■■□□□ 1.57
PDLIM2-202ENST00000308354 HSP90AA2PQ14568 343 aaPredicted RBP24.86■■□□□ 1.57
PDLIM2-202ENST00000308354 VSIG10LQ86VR7 867 aa24.86■■□□□ 1.57
PDLIM2-202ENST00000308354 ZNF507Q8TCN5 953 aa24.86■■□□□ 1.57
PDLIM2-202ENST00000308354 NACC1Q96RE7 527 aa24.86■■□□□ 1.57
PDLIM2-202ENST00000308354 PTPRFP10586 1907 aa24.86■■□□□ 1.57
PDLIM2-202ENST00000308354 RRP9O43818 475 aaKnown RBP24.86■■□□□ 1.57
PDLIM2-202ENST00000308354 LRRC55Q6ZSA7 311 aa24.86■■□□□ 1.57
PDLIM2-202ENST00000308354 ERO1BQ86YB8 467 aa24.86■■□□□ 1.57
PDLIM2-202ENST00000308354 TSG101Q99816 390 aa24.86■■□□□ 1.57
PDLIM2-202ENST00000308354 NOC4LQ9BVI4 516 aaKnown RBP24.86■■□□□ 1.57
PDLIM2-202ENST00000308354 MYPNQ86TC9 1320 aa24.86■■□□□ 1.57
PDLIM2-202ENST00000308354 PAPPA2Q9BXP8 1791 aa24.86■■□□□ 1.57
PDLIM2-202ENST00000308354 TBCAO75347 108 aaKnown RBP24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 TPM1P09493 284 aa24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 POTEJP0CG39 1038 aa24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 ZCWPW2Q504Y3 356 aa24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 RAD9BQ6WBX8 426 aa24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 C1orf186Q6ZWK4 172 aa24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 DNAI1Q9UI46 699 aa24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 TRAF5O00463 557 aa24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 TUBB4AP04350 444 aa24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 MYBP10242 640 aa24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 CCND2P30279 289 aa24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 MIIPQ5JXC2 388 aa24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 LBX2Q6XYB7 198 aa24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 NSUN6Q8TEA1 469 aaKnown RBP24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 NAA15Q9BXJ9 866 aaKnown RBP24.85■■□□□ 1.57
PDLIM2-202ENST00000308354 A0A0G2JLL6 359 aaPredicted RBP24.84■■□□□ 1.57
PDLIM2-202ENST00000308354 FANCGO15287 622 aa24.84■■□□□ 1.57
PDLIM2-202ENST00000308354 NAA30Q147X3 362 aaPredicted RBP24.84■■□□□ 1.57
PDLIM2-202ENST00000308354 PRRT2Q7Z6L0 340 aaPredicted RBP24.84■■□□□ 1.57
PDLIM2-202ENST00000308354 SH2D3AQ9BRG2 576 aa24.84■■□□□ 1.57
PDLIM2-202ENST00000308354 TBC1D22BQ9NU19 505 aa24.84■■□□□ 1.57
PDLIM2-202ENST00000308354 KLK7P49862 253 aa24.84■■□□□ 1.57
PDLIM2-202ENST00000308354 NCBP1Q09161 790 aaKnown RBP24.84■■□□□ 1.57
PDLIM2-202ENST00000308354 PAGR1Q9BTK6 254 aa24.84■■□□□ 1.57
PDLIM2-202ENST00000308354 KCTD10Q9H3F6 313 aa24.84■■□□□ 1.57
PDLIM2-202ENST00000308354 MRPL44Q9H9J2 332 aaKnown RBP24.84■■□□□ 1.57
PDLIM2-202ENST00000308354 ZNF215Q9UL58 517 aaPredicted RBP24.84■■□□□ 1.57
PDLIM2-202ENST00000308354 SPDYE5A6NIY4 337 aa24.83■■□□□ 1.57
PDLIM2-202ENST00000308354 RGS20O76081 388 aa24.83■■□□□ 1.57
PDLIM2-202ENST00000308354 PRPF6O94906 941 aaKnown RBP24.83■■□□□ 1.57
PDLIM2-202ENST00000308354 CCNE2O96020 404 aa24.83■■□□□ 1.57
PDLIM2-202ENST00000308354 TBC1D8BQ0IIM8 1120 aa24.83■■□□□ 1.57
PDLIM2-202ENST00000308354 KCTD17Q8N5Z5 321 aa24.83■■□□□ 1.57
PDLIM2-202ENST00000308354 CCDC51Q96ER9 411 aa24.83■■□□□ 1.57
PDLIM2-202ENST00000308354 ABHD10Q9NUJ1 306 aa24.83■■□□□ 1.57
PDLIM2-202ENST00000308354 CLEC11AQ9Y240 323 aa24.83■■□□□ 1.57
PDLIM2-202ENST00000308354 PHLPP2Q6ZVD8 1323 aa24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 SORBS3O60504 671 aa24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 P4HBP07237 508 aaKnown RBP24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 IRX3P78415 501 aaPredicted RBP24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 CNTN2Q02246 1040 aa24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 TRIM14Q14142 442 aa24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 ANKRD35Q8N283 1001 aa24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 OPTNQ96CV9 577 aa24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 TMEM150BA6NC51 233 aa24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 DNM2P50570 870 aa24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 UGCGQ16739 394 aa24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 MAEAQ7L5Y9 396 aa24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 MYCT1Q8N699 235 aa24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 R3HDMLQ9H3Y0 253 aa24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 ZNF408Q9H9D4 720 aa24.82■■□□□ 1.56
PDLIM2-202ENST00000308354 COL4A3BPQ9Y5P4 624 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms