RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 SETQ01105 290 aaPredicted RBP12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 SSRP1Q08945 709 aaKnown RBP12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 STK3Q13188 491 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 TOB2Q14106 344 aaPredicted RBP12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 GPNMBQ14956 572 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 GRIK4Q16099 956 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 PKN1Q16512 942 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 TRAF7Q6Q0C0 670 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 NIPA1Q7RTP0 329 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 PLA2G4DQ86XP0 818 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 PPM1EQ8WY54 764 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 SEPT8Q92599 483 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 AGO4Q9HCK5 861 aaKnown RBP12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 PDRG1Q9NUG6 133 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 VPS54Q9P1Q0 977 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 TUBE1Q9UJT0 475 aa12.37□□□□□ -0.43
HMGN1P35-201ENST00000303758 MEIS1O00470 390 aa12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 BACH1O14867 736 aa12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 AMHP03971 560 aa12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 EVCP57679 992 aa12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 NLRP5P59047 1200 aa12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 ACTR2P61160 394 aa12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 ITGB3BPQ13352 177 aaPredicted RBP12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 MBTPS1Q14703 1052 aa12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 NTRK3Q16288 839 aa12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 FAM117BQ6P1L5 589 aa12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 TAF2Q6P1X5 1199 aa12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 DBF4BQ8NFT6 615 aa12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 ZNF274Q96GC6 653 aaPredicted RBP12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 LARP6Q9BRS8 491 aaKnown RBP12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 ZNF577Q9BSK1 485 aa12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 CERS4Q9HA82 394 aa12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 MYH9P35579 1960 aaKnown RBP12.36□□□□□ -0.43
HMGN1P35-201ENST00000303758 RRN3P2A6NIE6 340 aa12.35□□□□□ -0.43
HMGN1P35-201ENST00000303758 DLL1O00548 723 aa12.35□□□□□ -0.43
HMGN1P35-201ENST00000303758 EIF5BO60841 1220 aaKnown RBP12.35□□□□□ -0.43
HMGN1P35-201ENST00000303758 DEXIO95424 95 aa12.35□□□□□ -0.43
HMGN1P35-201ENST00000303758 STAT5BP51692 787 aa12.35□□□□□ -0.43
HMGN1P35-201ENST00000303758 FAM160B1Q5W0V3 765 aa12.35□□□□□ -0.43
HMGN1P35-201ENST00000303758 TMCO2Q7Z6W1 182 aaPredicted RBP12.35□□□□□ -0.43
HMGN1P35-201ENST00000303758 MYOCDQ8IZQ8 938 aa12.35□□□□□ -0.43
HMGN1P35-201ENST00000303758 MICALL1Q8N3F8 863 aa12.35□□□□□ -0.43
HMGN1P35-201ENST00000303758 RASGRP4Q8TDF6 673 aa12.35□□□□□ -0.43
HMGN1P35-201ENST00000303758 ARNTL2Q8WYA1 636 aa12.35□□□□□ -0.43
HMGN1P35-201ENST00000303758 REV3LO60673 3130 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 FAM86B1E9PN63 330 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 M0QZ92 97 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 IPO5O00410 1097 aaKnown RBP12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 GTPBP6O43824 516 aaPredicted RBP12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 CDKL5O76039 1030 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 GJB5O95377 273 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 RPLP2P05387 115 aaKnown RBP12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 CYP3A4P08684 503 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 FAM86B2P0C5J1 330 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 INSRRP14616 1297 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 ADAM17P78536 824 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 CCDC85BQ15834 202 aaPredicted RBP12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 TCTN1Q2MV58 587 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 PRR16Q569H4 304 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 PLEKHG4Q58EX7 1191 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 RUFY4Q6ZNE9 571 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 PLPPR4Q7Z2D5 763 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 APBB2Q92870 758 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 UIMC1Q96RL1 719 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 RAD9AQ99638 391 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 IFIH1Q9BYX4 1025 aaKnown RBP12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 FAM49AQ9H0Q0 323 aaPredicted RBP12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 SH3GLB2Q9NR46 395 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 WDR81Q562E7 1941 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 LOXHD1Q8IVV2 1947 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 NLRC5Q86WI3 1866 aa12.34□□□□□ -0.43
HMGN1P35-201ENST00000303758 IGLV3-22A0A075B6J6 115 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 POTEB3A0JP26 581 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 PRR29P0C7W0 189 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 GHRP10912 638 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 SLC26A2P50443 739 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 ANAPC15P60006 121 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 TAP1Q03518 808 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 ADGRE1Q14246 886 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 PLCB4Q15147 1175 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 MIS18BP1Q6P0N0 1132 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 PDXDC2PQ6P474 469 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 POTEBQ6S5H4 581 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 CKAP2LQ8IYA6 745 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 USP38Q8NB14 1042 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 DNAJB3Q8WWF6 145 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 PCYT2Q99447 389 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 C22orf23Q9BZE7 217 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 SLKQ9H2G2 1235 aaPredicted RBP12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 ZNF302Q9NR11 478 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 TBC1D22BQ9NU19 505 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 SAMM50Q9Y512 469 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 MYO9BQ13459 2157 aa12.33□□□□□ -0.44
HMGN1P35-201ENST00000303758 LCHNA4D1U4 455 aa12.32□□□□□ -0.44
HMGN1P35-201ENST00000303758 MBLAC1A4D2B0 266 aaPredicted RBP12.32□□□□□ -0.44
HMGN1P35-201ENST00000303758 ADAMTS3O15072 1205 aa12.32□□□□□ -0.44
HMGN1P35-201ENST00000303758 XBP1P17861 261 aa12.32□□□□□ -0.44
HMGN1P35-201ENST00000303758 KRT76Q01546 638 aa12.32□□□□□ -0.44
HMGN1P35-201ENST00000303758 ANKRD1Q15327 319 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms