RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 MUM1L1Q5H9M0 696 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 FIGNQ5HY92 759 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 CACNA2D4Q7Z3S7 1137 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 PURBQ96QR8 312 aaKnown RBP21.06■□□□□ 0.96
SHF-201ENST00000290894 NAPGQ99747 312 aaPredicted RBP21.06■□□□□ 0.96
SHF-201ENST00000290894 WDR11Q9BZH6 1224 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 CNOT7Q9UIV1 285 aaKnown RBP21.06■□□□□ 0.96
SHF-201ENST00000290894 PLAGL2Q9UPG8 496 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 IPO5O00410 1097 aaKnown RBP21.05■□□□□ 0.96
SHF-201ENST00000290894 CLIC2O15247 247 aa21.05■□□□□ 0.96
SHF-201ENST00000290894 EYA4O95677 639 aa21.05■□□□□ 0.96
SHF-201ENST00000290894 PRPF38AQ8NAV1 312 aaKnown RBP21.05■□□□□ 0.96
SHF-201ENST00000290894 NEK11Q8NG66 645 aa21.05■□□□□ 0.96
SHF-201ENST00000290894 JAKMIP2Q96AA8 810 aa21.05■□□□□ 0.96
SHF-201ENST00000290894 IPO7O95373 1038 aaKnown RBP21.05■□□□□ 0.96
SHF-201ENST00000290894 H2AFXP16104 143 aaPredicted RBP21.05■□□□□ 0.96
SHF-201ENST00000290894 NMT1P30419 496 aaKnown RBP21.05■□□□□ 0.96
SHF-201ENST00000290894 ENOX2Q16206 610 aaKnown RBP21.05■□□□□ 0.96
SHF-201ENST00000290894 ZC2HC1CQ53FD0 456 aaPredicted RBP21.05■□□□□ 0.96
SHF-201ENST00000290894 WNK4Q96J92 1243 aa21.05■□□□□ 0.96
SHF-201ENST00000290894 SH2D3AQ9BRG2 576 aa21.05■□□□□ 0.96
SHF-201ENST00000290894 CDC23Q9UJX2 597 aa21.05■□□□□ 0.96
SHF-201ENST00000290894 EIF4A3P38919 411 aaKnown RBP21.04■□□□□ 0.96
SHF-201ENST00000290894 KNOP1Q1ED39 458 aaKnown RBP21.04■□□□□ 0.96
SHF-201ENST00000290894 MAEAQ7L5Y9 396 aa21.04■□□□□ 0.96
SHF-201ENST00000290894 BAP1Q92560 729 aa21.04■□□□□ 0.96
SHF-201ENST00000290894 ZKSCAN4Q969J2 545 aaPredicted RBP21.04■□□□□ 0.96
SHF-201ENST00000290894 LSM14BQ9BX40 385 aaKnown RBP21.04■□□□□ 0.96
SHF-201ENST00000290894 PLA2G6O60733 806 aa21.04■□□□□ 0.96
SHF-201ENST00000290894 KRT83P78385 493 aa21.04■□□□□ 0.96
SHF-201ENST00000290894 ARID5AQ03989 594 aa21.04■□□□□ 0.96
SHF-201ENST00000290894 SPP2Q13103 211 aa21.04■□□□□ 0.96
SHF-201ENST00000290894 PPP2R5CQ13362 524 aa21.04■□□□□ 0.96
SHF-201ENST00000290894 R3HDM1Q15032 1099 aaKnown RBP21.04■□□□□ 0.96
SHF-201ENST00000290894 TRIM59Q8IWR1 403 aa21.04■□□□□ 0.96
SHF-201ENST00000290894 MYCT1Q8N699 235 aa21.04■□□□□ 0.96
SHF-201ENST00000290894 CLEC4DQ8WXI8 215 aa21.04■□□□□ 0.96
SHF-201ENST00000290894 CEP63Q96MT8 703 aa21.04■□□□□ 0.96
SHF-201ENST00000290894 DEF6Q9H4E7 631 aa21.04■□□□□ 0.96
SHF-201ENST00000290894 HAUS4Q9H6D7 363 aa21.04■□□□□ 0.96
SHF-201ENST00000290894 CETN3O15182 167 aa21.03■□□□□ 0.96
SHF-201ENST00000290894 ZSCAN20P17040 1043 aaPredicted RBP21.03■□□□□ 0.96
SHF-201ENST00000290894 VCAM1P19320 739 aa21.03■□□□□ 0.96
SHF-201ENST00000290894 ZNF280AP59817 542 aaPredicted RBP21.03■□□□□ 0.96
SHF-201ENST00000290894 POLR2FP61218 127 aaKnown RBP21.03■□□□□ 0.96
SHF-201ENST00000290894 TNFAIP1Q13829 316 aa21.03■□□□□ 0.96
SHF-201ENST00000290894 SLC26A4O43511 780 aa21.03■□□□□ 0.96
SHF-201ENST00000290894 NOL4O94818 638 aa21.03■□□□□ 0.96
SHF-201ENST00000290894 EPS15P42566 896 aa21.03■□□□□ 0.96
SHF-201ENST00000290894 CASP4P49662 377 aa21.03■□□□□ 0.96
SHF-201ENST00000290894 CHMP4BP1P59074 171 aa21.03■□□□□ 0.96
SHF-201ENST00000290894 LXNQ9BS40 222 aa21.03■□□□□ 0.96
SHF-201ENST00000290894 PRDM10Q9NQV6 1147 aa21.03■□□□□ 0.96
SHF-201ENST00000290894 KCNH7Q9NS40 1196 aa21.03■□□□□ 0.96
SHF-201ENST00000290894 EIF3CLB5ME19 914 aaKnown RBP21.02■□□□□ 0.96
SHF-201ENST00000290894 SRGAP2O75044 1071 aa21.02■□□□□ 0.96
SHF-201ENST00000290894 SEC31AO94979 1220 aaKnown RBP21.02■□□□□ 0.96
SHF-201ENST00000290894 FAM13AO94988 1023 aa21.02■□□□□ 0.96
SHF-201ENST00000290894 KIF20AO95235 890 aa21.02■□□□□ 0.96
SHF-201ENST00000290894 EIF2AK2P19525 551 aaKnown RBP21.02■□□□□ 0.96
SHF-201ENST00000290894 KIF11P52732 1056 aa21.02■□□□□ 0.96
SHF-201ENST00000290894 DCAF17Q5H9S7 520 aaPredicted RBP21.02■□□□□ 0.96
SHF-201ENST00000290894 RSRC2Q7L4I2 434 aaKnown RBP21.02■□□□□ 0.96
SHF-201ENST00000290894 EPM2AIP1Q7L775 607 aaPredicted RBP21.02■□□□□ 0.96
SHF-201ENST00000290894 EIF3CQ99613 913 aaKnown RBP21.02■□□□□ 0.96
SHF-201ENST00000290894 EHMT1Q9H9B1 1298 aa21.02■□□□□ 0.96
SHF-201ENST00000290894 WDR46O15213 610 aaKnown RBP21.02■□□□□ 0.95
SHF-201ENST00000290894 AKR1B10O60218 316 aa21.02■□□□□ 0.95
SHF-201ENST00000290894 ATP1A1P05023 1023 aaKnown RBP21.02■□□□□ 0.95
SHF-201ENST00000290894 HSD17B4P51659 736 aa21.02■□□□□ 0.95
SHF-201ENST00000290894 KCNH2Q12809 1159 aa21.02■□□□□ 0.95
SHF-201ENST00000290894 TDRD12Q587J7 1177 aaKnown RBP21.02■□□□□ 0.95
SHF-201ENST00000290894 CCDC170Q8IYT3 715 aa21.02■□□□□ 0.95
SHF-201ENST00000290894 MXRA8Q9BRK3 442 aa21.02■□□□□ 0.95
SHF-201ENST00000290894 MYH10P35580 1976 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 AKAP3O75969 853 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 ACTN1P12814 892 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 PLS1Q14651 629 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 SPA17Q15506 151 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 C1orf186Q6ZWK4 172 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 ANKRD13CQ8N6S4 541 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 TEKT3Q9BXF9 490 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 MTFR1LQ9H019 292 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 RPAP3Q9H6T3 665 aaPredicted RBP21.01■□□□□ 0.95
SHF-201ENST00000290894 TUFT1Q9NNX1 390 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 DDX41Q9UJV9 622 aaKnown RBP21.01■□□□□ 0.95
SHF-201ENST00000290894 ASTN1O14525 1302 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 KRT86O43790 486 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 GFPT1Q06210 699 aaPredicted RBP21.01■□□□□ 0.95
SHF-201ENST00000290894 COG2Q14746 738 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 TCERG1LQ5VWI1 586 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 SRGAP1Q7Z6B7 1085 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 GOLGA1Q92805 767 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 IFIH1Q9BYX4 1025 aaKnown RBP21.01■□□□□ 0.95
SHF-201ENST00000290894 KIAA1683Q9H0B3 1180 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 SAMM50Q9Y512 469 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 PCDHB13Q9Y5F0 798 aa21.01■□□□□ 0.95
SHF-201ENST00000290894 EDRF1Q3B7T1 1238 aa21■□□□□ 0.95
SHF-201ENST00000290894 PDXDC1Q6P996 788 aa21■□□□□ 0.95
SHF-201ENST00000290894 FOXR2Q6PJQ5 311 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms