RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 EVCP57679 992 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 ACTR2P61160 394 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 MGAT3Q09327 533 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 GRB10Q13322 594 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 AP3B2Q13367 1082 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 GRIK4Q16099 956 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 TJAP1Q5JTD0 557 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 RPAINQ86UA6 219 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 TEX2Q8IWB9 1127 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 MYOCDQ8IZQ8 938 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 UIMC1Q96RL1 719 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 SMARCAD1Q9H4L7 1026 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 NCOA5Q9HCD5 579 aaKnown RBP10.89□□□□□ -0.67
HMHB1-201ENST00000289448 ERAP1Q9NZ08 941 aa10.89□□□□□ -0.67
HMHB1-201ENST00000289448 IGLV3-22A0A075B6J6 115 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 CCDC196A0A1B0GTZ2 297 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 DHX15O43143 795 aaKnown RBP10.88□□□□□ -0.67
HMHB1-201ENST00000289448 PRPF3O43395 683 aaKnown RBP10.88□□□□□ -0.67
HMHB1-201ENST00000289448 EDIL3O43854 480 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 REC8O95072 547 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 ATG7O95352 703 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 GHRP10912 638 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 INSRRP14616 1297 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 PDIA3P30101 505 aaKnown RBP10.88□□□□□ -0.67
HMHB1-201ENST00000289448 ERVK-21P61565 698 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 IGBP1P78318 339 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 HTRA4P83105 476 aaPredicted RBP10.88□□□□□ -0.67
HMHB1-201ENST00000289448 TOB2Q14106 344 aaPredicted RBP10.88□□□□□ -0.67
HMHB1-201ENST00000289448 PLCB4Q15147 1175 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 RASGRP4Q8TDF6 673 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 GDPD5Q8WTR4 605 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 TRAPPC12Q8WVT3 735 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 DNAJB3Q8WWF6 145 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 ATXN2LQ8WWM7 1075 aaKnown RBP10.88□□□□□ -0.67
HMHB1-201ENST00000289448 SEPT8Q92599 483 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 ASB2Q96Q27 587 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 LARP6Q9BRS8 491 aaKnown RBP10.88□□□□□ -0.67
HMHB1-201ENST00000289448 ZMYND12Q9H0C1 365 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 GLT8D2Q9H1C3 349 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 SUGCTQ9HAC7 445 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 ZSWIM6Q9HCJ5 1215 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 THEGQ9P2T0 379 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 TUBE1Q9UJT0 475 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 MTUS1Q9ULD2 1270 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 MYO7AQ13402 2215 aa10.88□□□□□ -0.67
HMHB1-201ENST00000289448 IGKV6D-21A0A0A0MT36 114 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 ESYT2A0FGR8 921 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 DDX39AO00148 427 aaKnown RBP10.87□□□□□ -0.67
HMHB1-201ENST00000289448 AMHP03971 560 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 CYP3A4P08684 503 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 IFNAR1P17181 557 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 PSMA5P28066 241 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 STAT5BP51692 787 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 CCT2P78371 535 aaKnown RBP10.87□□□□□ -0.67
HMHB1-201ENST00000289448 TFF2Q03403 129 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 LPIN1Q14693 890 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 TAF2Q6P1X5 1199 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 ABHD15Q6UXT9 468 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 RUFY3Q7L099 469 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 NIPA1Q7RTP0 329 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 PLPPR4Q7Z2D5 763 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 SP7Q8TDD2 431 aaPredicted RBP10.87□□□□□ -0.67
HMHB1-201ENST00000289448 TOP1MTQ969P6 601 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 TGS1Q96RS0 853 aaKnown RBP10.87□□□□□ -0.67
HMHB1-201ENST00000289448 SDF4Q9BRK5 362 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 C17orf80Q9BSJ5 609 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 SLC26A6Q9BXS9 759 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 IFIH1Q9BYX4 1025 aaKnown RBP10.87□□□□□ -0.67
HMHB1-201ENST00000289448 AZI2Q9H6S1 392 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 INSL6Q9Y581 213 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 MICAL3Q7RTP6 2002 aa10.87□□□□□ -0.67
HMHB1-201ENST00000289448 KAT6AQ92794 2004 aa10.86□□□□□ -0.67
HMHB1-201ENST00000289448 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
HMHB1-201ENST00000289448 UPP2O95045 317 aa10.86□□□□□ -0.67
HMHB1-201ENST00000289448 ATP4AP20648 1035 aa10.86□□□□□ -0.67
HMHB1-201ENST00000289448 ZNF76P36508 570 aa10.86□□□□□ -0.67
HMHB1-201ENST00000289448 MRPS5P82675 430 aaKnown RBP10.86□□□□□ -0.67
HMHB1-201ENST00000289448 FBXO47Q5MNV8 452 aa10.86□□□□□ -0.67
HMHB1-201ENST00000289448 PLA2G4DQ86XP0 818 aa10.86□□□□□ -0.67
HMHB1-201ENST00000289448 REXO1Q8N1G1 1221 aaKnown RBP10.86□□□□□ -0.67
HMHB1-201ENST00000289448 UPF3BQ9BZI7 483 aaKnown RBP10.86□□□□□ -0.67
HMHB1-201ENST00000289448 FAM49AQ9H0Q0 323 aaPredicted RBP10.86□□□□□ -0.67
HMHB1-201ENST00000289448 AGO3Q9H9G7 860 aaKnown RBP10.86□□□□□ -0.67
HMHB1-201ENST00000289448 C6orf50Q9HD87 102 aa10.86□□□□□ -0.67
HMHB1-201ENST00000289448 VPS54Q9P1Q0 977 aa10.86□□□□□ -0.67
HMHB1-201ENST00000289448 TRPC6Q9Y210 931 aa10.86□□□□□ -0.67
HMHB1-201ENST00000289448 CDY2AQ9Y6F7 541 aa10.86□□□□□ -0.67
HMHB1-201ENST00000289448 POTEB3A0JP26 581 aa10.85□□□□□ -0.67
HMHB1-201ENST00000289448 RRN3P2A6NIE6 340 aa10.85□□□□□ -0.67
HMHB1-201ENST00000289448 IPO5O00410 1097 aaKnown RBP10.85□□□□□ -0.67
HMHB1-201ENST00000289448 MRPS6P82932 125 aaKnown RBP10.85□□□□□ -0.67
HMHB1-201ENST00000289448 TMEM62Q0P6H9 643 aa10.85□□□□□ -0.67
HMHB1-201ENST00000289448 SKIV2LQ15477 1246 aaKnown RBP10.85□□□□□ -0.67
HMHB1-201ENST00000289448 POTEBQ6S5H4 581 aa10.85□□□□□ -0.67
HMHB1-201ENST00000289448 RSPH3Q86UC2 560 aa10.85□□□□□ -0.67
HMHB1-201ENST00000289448 CCDC60Q8IWA6 550 aaPredicted RBP10.85□□□□□ -0.67
HMHB1-201ENST00000289448 SYMPKQ92797 1274 aaKnown RBP10.85□□□□□ -0.67
HMHB1-201ENST00000289448 APBB2Q92870 758 aa10.85□□□□□ -0.67
HMHB1-201ENST00000289448 LENG9Q96B70 501 aa10.85□□□□□ -0.67
HMHB1-201ENST00000289448 RNF26Q9BY78 433 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms