RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 KCND2Q9NZV8 630 aa9.42□□□□□ -0.9
PTPDC1-201ENST00000288976 IGKV6D-21A0A0A0MT36 114 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 FARP2O94887 1054 aaPredicted RBP9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 PSAPP07602 524 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 GRB10Q13322 594 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 ENOX2Q16206 610 aaKnown RBP9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 MFSD14CQ5VZR4 134 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 MIER3Q7Z3K6 550 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 SNX29Q8TEQ0 813 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 HSD17B14Q9BPX1 270 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 WBP1LQ9NX94 342 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 SRRDQ9UH36 339 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 EMSYQ7Z589 1322 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 A0A1B0GVL5 298 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 POTEMA6NI47 508 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 NR1I2O75469 434 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 ACVR2BQ13705 512 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 LAMC2Q13753 1193 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 CEP57L1Q8IYX8 460 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 EIF2AK1Q9BQI3 630 aaKnown RBP9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 NUP62CLQ9H1M0 184 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 DBR1Q9UK59 544 aaKnown RBP9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 LGR5O75473 907 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 GH1P01241 217 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 P4HBP07237 508 aaKnown RBP9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 NCAPH2Q6IBW4 605 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 RAD54LQ92698 747 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 EPSTI1Q96J88 318 aa9.41□□□□□ -0.9
PTPDC1-201ENST00000288976 TRPA1O75762 1119 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 ZNF865P0CJ78 1059 aaPredicted RBP9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 CCT6AP40227 531 aaKnown RBP9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 STAT6P42226 847 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 NT5DC1Q5TFE4 455 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 CCDC181Q5TID7 509 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 RRAGBQ5VZM2 374 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 PNMA5Q96PV4 448 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 DACT1Q9NYF0 836 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 DOCK5Q9H7D0 1870 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 GOLGA6L3A6NEY3 463 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 CYBAP13498 195 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 AMPD3Q01432 767 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 DUSP28Q4G0W2 176 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 ABHD15Q6UXT9 468 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 SEPT14Q6ZU15 432 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 FBXO16Q8IX29 292 aaPredicted RBP9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 C4orf19Q8IY42 314 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 SLAIN1Q8ND83 568 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 PPTC7Q8NI37 304 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 TIPINQ9BVW5 301 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 PCDHA10Q9Y5I2 948 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 SUPT20HL2P0C7V6 817 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 SPATA31C1P0DKV0 1188 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 SLC26A2P50443 739 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 MDM2Q00987 491 aaPredicted RBP9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 FAM160B1Q5W0V3 765 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 DNAJC5GQ8N7S2 189 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 ATP6V0A1Q93050 837 aa9.4□□□□□ -0.9
PTPDC1-201ENST00000288976 A0A087X0B3 334 aa9.4□□□□□ -0.91
PTPDC1-201ENST00000288976 PLCG1P19174 1290 aa9.4□□□□□ -0.91
PTPDC1-201ENST00000288976 PSMC5P62195 406 aa9.4□□□□□ -0.91
PTPDC1-201ENST00000288976 KBTBD4Q9NVX7 518 aa9.4□□□□□ -0.91
PTPDC1-201ENST00000288976 FLRT1Q9NZU1 646 aa9.4□□□□□ -0.91
PTPDC1-201ENST00000288976 MAFBQ9Y5Q3 323 aaPredicted RBP9.4□□□□□ -0.91
PTPDC1-201ENST00000288976 POLR2DO15514 142 aaKnown RBP9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 ATP9AO75110 1047 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 CCNE2O96020 404 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 PLPPR4Q7Z2D5 763 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 CATSPER3Q86XQ3 398 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 CNNM3Q8NE01 707 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 NACC1Q96RE7 527 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 UPF3AQ9H1J1 476 aaKnown RBP9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 ZSWIM4Q9H7M6 989 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 EYA4O95677 639 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 HMGCRP04035 888 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 CAPN2P17655 700 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 SP2Q02086 613 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 PRKCZQ05513 592 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 CD99L2Q8TCZ2 262 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 ZNF296Q8WUU4 475 aaPredicted RBP9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 LARP4BQ92615 738 aaKnown RBP9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 FAM167AQ96KS9 214 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 C7orf25Q9BPX7 421 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 ANKEF1Q9NU02 776 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 FAM184BQ9ULE4 1060 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 GON4LQ3T8J9 2241 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 GTPBP6O43824 516 aaPredicted RBP9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 MED24O75448 989 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 SLITRK3O94933 977 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 IDEP14735 1019 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 QARSP47897 775 aaKnown RBP9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 ACTR2P61160 394 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 ARHGAP1Q07960 439 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 NAALADL2Q58DX5 795 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 GOLGA6L1Q8N7Z2 621 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 TRIML1Q8N9V2 468 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 SPATA20Q8TB22 786 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 ARHGAP39Q9C0H5 1083 aa9.39□□□□□ -0.91
PTPDC1-201ENST00000288976 MCM3APO60318 1980 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 EML1O00423 815 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 TXNP10599 105 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms