RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 TNFAIP1Q13829 316 aa20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 TTI2Q6NXR4 508 aa20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 DHTKD1Q96HY7 919 aaPredicted RBP20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 DUSP9Q99956 384 aaKnown RBP20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 NHEJ1Q9H9Q4 299 aaPredicted RBP20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 NPHP3-ACAD11A0A0J9YXS1 232 aa20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 POTEFA5A3E0 1075 aa20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 MSH4O15457 936 aa20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 POTEIP0CG38 1075 aa20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 TRIM21P19474 475 aaKnown RBP20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 GGCXP38435 758 aa20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 ANKRD40Q6AI12 368 aa20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 POTEGQ6S5H5 508 aa20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 POTEEQ6S8J3 1075 aa20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 LDHDQ86WU2 507 aa20.19■□□□□ 0.82
PDLIM3-201ENST00000284767 MEIS1O00470 390 aa20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 FOSP01100 380 aaPredicted RBP20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 ZNF76P36508 570 aa20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 LRRC41Q15345 812 aa20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 TTC31Q49AM3 519 aaPredicted RBP20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 DNAJC21Q5F1R6 531 aaKnown RBP20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 TRPM4Q8TD43 1214 aa20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 TUBGCP2Q9BSJ2 902 aa20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 SH2D4AQ9H788 454 aa20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 TFR2Q9UP52 801 aa20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 B4DLN1 442 aa20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 ITIH3Q06033 890 aa20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 ANGEL2Q5VTE6 544 aaKnown RBP20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 NAP1L4Q99733 375 aaKnown RBP20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 LACRTQ9GZZ8 138 aa20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 FAM107BQ9H098 131 aa20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 FAM184BQ9ULE4 1060 aa20.18■□□□□ 0.82
PDLIM3-201ENST00000284767 PIK3CDO00329 1044 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 PSMC6P62333 389 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 Q4G0T1 1027 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 FIGNQ5HY92 759 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 FAM114A1Q8IWE2 563 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 CPXCR1Q8N123 301 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 FAM76AQ8TAV0 307 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 ZKSCAN4Q969J2 545 aaPredicted RBP20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 IQCDQ96DY2 449 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 WDR18Q9BV38 432 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 AGPAT5Q9NUQ2 364 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 FEM1BQ9UK73 627 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 LTBP3Q9NS15 1303 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 A0A1W2PQJ5 194 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 RCCD1A6NED2 376 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 VAV2P52735 878 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 KIF5AQ12840 1032 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 MAPK8IP2Q13387 824 aaPredicted RBP20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 MTMR2Q13614 643 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 MOXD1Q6UVY6 613 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 UNC13DQ70J99 1090 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 ZNF572Q7Z3I7 529 aaPredicted RBP20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 EFCAB13Q8IY85 973 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 MMGT1Q8N4V1 131 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 AENQ8WTP8 325 aaKnown RBP20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 SECISBP2LQ93073 1101 aaKnown RBP20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 P2RX5Q93086 422 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 FGFBP2Q9BYJ0 223 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 SEMA6BQ9H3T3 888 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 TBC1D7Q9P0N9 293 aa20.17■□□□□ 0.82
PDLIM3-201ENST00000284767 ZNF536O15090 1300 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 BICDL2A1A5D9 508 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 GCOM1H8Y6P7 765 aaPredicted RBP20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 AGPSO00116 658 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 POLR2MP0CAP2 368 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 CYP4A11Q02928 519 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 CATSPER3Q86XQ3 398 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 SLFN12Q8IYM2 578 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 CSGALNACT2Q8N6G5 542 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 CCDC47Q96A33 483 aaKnown RBP20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 DNAJC19Q96DA6 116 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 IGLV3-22A0A075B6J6 115 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 GOLGA6BA6NDN3 693 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 PDE2AO00408 941 aaPredicted RBP20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 CNNM4Q6P4Q7 775 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 DLK2Q6UY11 383 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 FAM160B2Q86V87 743 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 JADE2Q9NQC1 790 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 HOMER2Q9NSB8 354 aa20.16■□□□□ 0.82
PDLIM3-201ENST00000284767 MYBL2P10244 700 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 CCNE1P24864 410 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 CIITAP33076 1130 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 PPP1R2P41236 205 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 TBC1D8BQ0IIM8 1120 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 TRIM58Q8NG06 486 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 RIN2Q8WYP3 895 aaPredicted RBP20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 TANGO6Q9C0B7 1094 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 POLD4Q9HCU8 107 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 CCPG1Q9ULG6 757 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 JRKLQ9Y4A0 524 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 RASSF10A6NK89 507 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 EML1O00423 815 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 NFIBO00712 420 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 ZMYND10O75800 440 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 PLA2G4BP0C869 781 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 PRLRP16471 622 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 ERCC3P19447 782 aa20.15■□□□□ 0.82
PDLIM3-201ENST00000284767 HYIQ5T013 277 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms