RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 IQCDQ96DY2 449 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 TRIM11Q96F44 468 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 RAB3IPQ96QF0 476 aaPredicted RBP10.02□□□□□ -0.81
PDGFC-201ENST00000274071 SIKE1Q9BRV8 207 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 MIS12Q9H081 205 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 LUC7LQ9NQ29 371 aaKnown RBP10.02□□□□□ -0.81
PDGFC-201ENST00000274071 SUCLA2Q9P2R7 463 aaPredicted RBP10.02□□□□□ -0.81
PDGFC-201ENST00000274071 USP15Q9Y4E8 981 aaPredicted RBP10.02□□□□□ -0.81
PDGFC-201ENST00000274071 ZNF263O14978 683 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 GRIN1Q05586 938 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 TEFQ10587 303 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 ITGA7Q13683 1181 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 SAFBQ15424 915 aaKnown RBP eCLIP10.02□□□□□ -0.81
PDGFC-201ENST00000274071 MEA1Q16626 185 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 RBM26Q5T8P6 1007 aaKnown RBP10.02□□□□□ -0.81
PDGFC-201ENST00000274071 SAMD3Q8N6K7 520 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 SNX27Q96L92 541 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 CATSPER2Q96P56 530 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 POLR3CQ9BUI4 534 aaPredicted RBP10.02□□□□□ -0.81
PDGFC-201ENST00000274071 ADAM7Q9H2U9 754 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 FBXL5Q9UKA1 691 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 ZNF711Q9Y462 761 aa10.02□□□□□ -0.81
PDGFC-201ENST00000274071 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.02□□□□□ -0.81
PDGFC-201ENST00000274071 PPP1R3GB7ZBB8 358 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 BOLA2-SMG1P6H3BVE0 249 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 ZCCHC18P0CG32 403 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 TROVE2P10155 538 aaKnown RBP eCLIP10.01□□□□□ -0.81
PDGFC-201ENST00000274071 ADARP55265 1226 aaKnown RBP10.01□□□□□ -0.81
PDGFC-201ENST00000274071 C1orf141Q5JVX7 400 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 SYDE2Q5VT97 1194 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 FAM47EQ6ZV65 393 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 ZC3H18Q86VM9 953 aaKnown RBP10.01□□□□□ -0.81
PDGFC-201ENST00000274071 MAP7D3Q8IWC1 876 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 FAM13CQ8NE31 585 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.01□□□□□ -0.811e-6■■■■■ 58.1
PDGFC-201ENST00000274071 HAUS1Q96CS2 278 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 TLR10Q9BXR5 811 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 ISCUQ9H1K1 167 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 THAP9Q9H5L6 903 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 ITGB1BP2Q9UKP3 347 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 A6NJR5 290 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 RAD51CO43502 376 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 LDHAP00338 332 aaKnown RBP10.01□□□□□ -0.81
PDGFC-201ENST00000274071 PYGMP11217 842 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 FLT3P36888 993 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 MTTPP55157 894 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 RTP1P59025 263 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 DAB2IPQ5VWQ8 1189 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 KRT26Q7Z3Y9 468 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 C14orf80Q86SX3 495 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 VPS37DQ86XT2 251 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 TTC8Q8TAM2 541 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 SCG3Q8WXD2 468 aaKnown RBP10.01□□□□□ -0.81
PDGFC-201ENST00000274071 EDC3Q96F86 508 aaKnown RBP10.01□□□□□ -0.81
PDGFC-201ENST00000274071 CCDC8Q9H0W5 538 aaPredicted RBP10.01□□□□□ -0.81
PDGFC-201ENST00000274071 RXFP1Q9HBX9 757 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 TLR7Q9NYK1 1049 aaKnown RBP10.01□□□□□ -0.81
PDGFC-201ENST00000274071 CAPN11Q9UMQ6 739 aa10.01□□□□□ -0.81
PDGFC-201ENST00000274071 DCCP43146 1447 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 A0A0G2JS52 829 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 RGL2O15211 777 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 ZPR1O75312 459 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 ENTPD5O75356 428 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 UNC5CO95185 931 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 ALDH2P05091 517 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 UBTFL6P0CB48 400 aaPredicted RBP10□□□□□ -0.81
PDGFC-201ENST00000274071 NFKBIAP25963 317 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 MMP13P45452 471 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 SH3BGRP55822 239 aaPredicted RBP10□□□□□ -0.81
PDGFC-201ENST00000274071 ERVK-9P63128 1117 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 DPYDQ12882 1025 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 MAP7Q14244 749 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 PARP6Q2NL67 630 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 KLC3Q6P597 504 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 PDCD7Q8N8D1 485 aaKnown RBP10□□□□□ -0.81
PDGFC-201ENST00000274071 KRI1Q8N9T8 703 aaKnown RBP10□□□□□ -0.81
PDGFC-201ENST00000274071 EAF2Q96CJ1 260 aaPredicted RBP10□□□□□ -0.81
PDGFC-201ENST00000274071 SMC6Q96SB8 1091 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 DPH5Q9H2P9 285 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 GPHNQ9NQX3 736 aaPredicted RBP10□□□□□ -0.81
PDGFC-201ENST00000274071 HEY1Q9Y5J3 304 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 CACNA1FO60840 1977 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 RGPD5Q99666 1765 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 ALS2Q96Q42 1657 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 BTBD11A6QL63 1104 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 HGSO14964 777 aaPredicted RBP10□□□□□ -0.81
PDGFC-201ENST00000274071 STIP1P31948 543 aaKnown RBP10□□□□□ -0.81
PDGFC-201ENST00000274071 VHLP40337 213 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 PDE6CP51160 858 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 GEMIN4P57678 1058 aaKnown RBP10□□□□□ -0.81
PDGFC-201ENST00000274071 EIF4A1P60842 406 aaKnown RBP10□□□□□ -0.81
PDGFC-201ENST00000274071 TCP11X2Q5H9J9 407 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 GRAMD4Q6IC98 578 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 SPATA24Q86W54 205 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 DDX42Q86XP3 938 aaKnown RBP eCLIP10□□□□□ -0.81
PDGFC-201ENST00000274071 CABLES1Q8TDN4 633 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 SELENOSQ9BQE4 189 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 NEUROG2Q9H2A3 272 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 CCDC134Q9H6E4 229 aa10□□□□□ -0.81
PDGFC-201ENST00000274071 SH2D4AQ9H788 454 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms