RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 TCP11X1B4DZS4 312 aa13.97□□□□□ -0.17
HERC6-202ENST00000273960 ATP4AP20648 1035 aa13.97□□□□□ -0.17
HERC6-202ENST00000273960 BIRC3Q13489 604 aa13.97□□□□□ -0.17
HERC6-202ENST00000273960 TNIP1Q15025 636 aa13.97□□□□□ -0.17
HERC6-202ENST00000273960 NPY5RQ15761 445 aa13.97□□□□□ -0.17
HERC6-202ENST00000273960 MAB21L3Q8N8X9 362 aa13.97□□□□□ -0.17
HERC6-202ENST00000273960 GPR101Q96P66 508 aaPredicted RBP13.97□□□□□ -0.17
HERC6-202ENST00000273960 ZSCAN10Q96SZ4 725 aaPredicted RBP13.97□□□□□ -0.17
HERC6-202ENST00000273960 CREB1P16220 341 aa13.97□□□□□ -0.17
HERC6-202ENST00000273960 ATP2A2P16615 1042 aaKnown RBP13.97□□□□□ -0.17
HERC6-202ENST00000273960 ABCB4P21439 1286 aa13.97□□□□□ -0.17
HERC6-202ENST00000273960 TXKP42681 527 aa13.97□□□□□ -0.17
HERC6-202ENST00000273960 FAM129AQ9BZQ8 928 aa13.97□□□□□ -0.17
HERC6-202ENST00000273960 TRPM3Q9HCF6 1732 aaPredicted RBP13.97□□□□□ -0.17
HERC6-202ENST00000273960 STRCP1A6NGW2 1772 aa13.97□□□□□ -0.17
HERC6-202ENST00000273960 TLR2O60603 784 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 CSF1RP07333 972 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 GOLGA8HP0CJ92 632 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 NEFHP12036 1026 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 NCALDP61601 193 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 LACTBP83111 547 aaPredicted RBP13.96□□□□□ -0.17
HERC6-202ENST00000273960 ATP11AP98196 1134 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 ITIH3Q06033 890 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 FAM83BQ5T0W9 1011 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 PDXDC1Q6P996 788 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 INTS5Q6P9B9 1019 aaKnown RBP13.96□□□□□ -0.17
HERC6-202ENST00000273960 PEX26Q7Z412 305 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 METTL13Q8N6R0 699 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 GJA10Q969M2 543 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 ZFATQ9P243 1243 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 USP21Q9UK80 565 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 SIK3Q9Y2K2 1263 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 GOLGA6L10A0A0M3HER8 536 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 F8VZ95 297 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 PECAM1P16284 738 aaPredicted RBP13.96□□□□□ -0.17
HERC6-202ENST00000273960 RFC4P35249 363 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 TRIM28Q13263 835 aaKnown RBP13.96□□□□□ -0.17
HERC6-202ENST00000273960 LACTB2Q53H82 288 aaPredicted RBP13.96□□□□□ -0.17
HERC6-202ENST00000273960 TMTC2Q8N394 836 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 KIAA0895Q8NCT3 520 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 TMEM237Q96Q45 408 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 ADAM33Q9BZ11 813 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 BATF3Q9NR55 127 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 TCP11L1Q9NUJ3 509 aa13.96□□□□□ -0.17
HERC6-202ENST00000273960 NKX1-2Q9UD57 310 aaPredicted RBP13.96□□□□□ -0.17
HERC6-202ENST00000273960 TMEM110-MUSTN1A8MSY1 372 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 RAD21O60216 631 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 CCNT1O60563 726 aaKnown RBP13.96□□□□□ -0.18
HERC6-202ENST00000273960 FGGP02679 453 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 SCG2P13521 617 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 RAD23BP54727 409 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 SLC29A2Q14542 456 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 ERMARDQ5T6L9 678 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 RNF220Q5VTB9 566 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 ZNF449Q6P9G9 518 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 TMC3Q7Z5M5 1100 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 DHTKD1Q96HY7 919 aaPredicted RBP13.96□□□□□ -0.18
HERC6-202ENST00000273960 ERGIC2Q96RQ1 377 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 FMO2Q99518 471 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 SLC5A4Q9NY91 659 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 CHORDC1Q9UHD1 332 aaPredicted RBP13.96□□□□□ -0.18
HERC6-202ENST00000273960 TBK1Q9UHD2 729 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 UTP11Q9Y3A2 253 aaKnown RBP13.96□□□□□ -0.18
HERC6-202ENST00000273960 RTCBQ9Y3I0 505 aaKnown RBP13.96□□□□□ -0.18
HERC6-202ENST00000273960 SPATA31A1Q5TZJ5 1347 aa13.96□□□□□ -0.18
HERC6-202ENST00000273960 PAPOLAP51003 745 aaKnown RBP13.95□□□□□ -0.18
HERC6-202ENST00000273960 RAB27AP51159 221 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 C3orf67Q6ZVT6 689 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 MREGQ8N565 214 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 TEKT4Q8WW24 435 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 CELF1Q92879 486 aaKnown RBP13.95□□□□□ -0.18
HERC6-202ENST00000273960 L3MBTL3Q96JM7 780 aaPredicted RBP13.95□□□□□ -0.18
HERC6-202ENST00000273960 TRIM9Q9C026 710 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 ETNK1Q9HBU6 452 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 PTPN22Q9Y2R2 807 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 MRC1P22897 1456 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 TCRBV5S4A2TA0A5A2 114 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 PRPF3O43395 683 aaKnown RBP13.95□□□□□ -0.18
HERC6-202ENST00000273960 RHOBTB3O94955 611 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 MEI1Q5TIA1 1274 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 AADACL2Q6P093 401 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 DLGAP2Q9P1A6 1054 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 ZNF219Q9P2Y4 722 aaPredicted RBP13.95□□□□□ -0.18
HERC6-202ENST00000273960 SH3BP1Q9Y3L3 701 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 N4BP2Q86UW6 1770 aaPredicted RBP13.95□□□□□ -0.18
HERC6-202ENST00000273960 HIP1RO75146 1068 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 TNFRSF8P28908 595 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 LONP1P36776 959 aaKnown RBP13.95□□□□□ -0.18
HERC6-202ENST00000273960 RPS6KA3P51812 740 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 DENND2CQ68D51 928 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 ADGRA1Q86SQ6 560 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 BLIDQ8IZY5 108 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 BAP1Q92560 729 aa13.95□□□□□ -0.18
HERC6-202ENST00000273960 NAF1Q96HR8 494 aaKnown RBP13.95□□□□□ -0.18
HERC6-202ENST00000273960 C5P01031 1676 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 PGRMC1O00264 195 aaKnown RBP13.94□□□□□ -0.18
HERC6-202ENST00000273960 RARAP10276 462 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 MSH2P43246 934 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 SSR1P43307 286 aaKnown RBP13.94□□□□□ -0.18
HERC6-202ENST00000273960 TCERG1LQ5VWI1 586 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms