RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SAP30BPQ9UHR5 308 aaKnown RBP11.69□□□□□ -0.54
LRTM1-201ENST00000273286 MYH1P12882 1939 aa11.68□□□□□ -0.54
LRTM1-201ENST00000273286 KIAA1324LA8MWY0 1029 aaPredicted RBP11.68□□□□□ -0.54
LRTM1-201ENST00000273286 EIF4EBP3O60516 100 aaPredicted RBP11.68□□□□□ -0.54
LRTM1-201ENST00000273286 MSCO60682 206 aa11.68□□□□□ -0.54
LRTM1-201ENST00000273286 DYNLL1P63167 89 aaKnown RBP11.68□□□□□ -0.54
LRTM1-201ENST00000273286 JAG1P78504 1218 aa11.68□□□□□ -0.54
LRTM1-201ENST00000273286 HNRNPUQ00839 825 aaKnown RBP eCLIP11.68□□□□□ -0.54
LRTM1-201ENST00000273286 ABCB5Q2M3G0 1257 aa11.68□□□□□ -0.54
LRTM1-201ENST00000273286 CERKLQ49MI3 558 aaPredicted RBP11.68□□□□□ -0.54
LRTM1-201ENST00000273286 EXOSC6Q5RKV6 272 aaKnown RBP11.68□□□□□ -0.54
LRTM1-201ENST00000273286 CEP85Q6P2H3 762 aa11.68□□□□□ -0.54
LRTM1-201ENST00000273286 USP6NLQ92738 828 aa11.68□□□□□ -0.54
LRTM1-201ENST00000273286 NRSN2Q9GZP1 204 aa11.68□□□□□ -0.54
LRTM1-201ENST00000273286 CHMP4BQ9H444 224 aaKnown RBP11.68□□□□□ -0.54
LRTM1-201ENST00000273286 TXNRD2Q9NNW7 524 aa11.68□□□□□ -0.54
LRTM1-201ENST00000273286 NPHS2Q9NP85 383 aa11.68□□□□□ -0.54
LRTM1-201ENST00000273286 IVNS1ABPQ9Y6Y0 642 aa11.68□□□□□ -0.54
LRTM1-201ENST00000273286 PLXNB2O15031 1838 aa11.67□□□□□ -0.54
LRTM1-201ENST00000273286 LAMA3Q16787 3333 aa11.67□□□□□ -0.54
LRTM1-201ENST00000273286 CPNE3O75131 537 aaKnown RBP11.67□□□□□ -0.54
LRTM1-201ENST00000273286 HMMRO75330 724 aa11.67□□□□□ -0.54
LRTM1-201ENST00000273286 GRIK1P39086 918 aa11.67□□□□□ -0.54
LRTM1-201ENST00000273286 RAB3GAP1Q15042 981 aa11.67□□□□□ -0.54
LRTM1-201ENST00000273286 ZNF423Q2M1K9 1284 aa11.67□□□□□ -0.54
LRTM1-201ENST00000273286 AACSQ86V21 672 aa11.67□□□□□ -0.54
LRTM1-201ENST00000273286 CLASRPQ8N2M8 674 aaKnown RBP11.67□□□□□ -0.54
LRTM1-201ENST00000273286 MIGA1Q8NAN2 632 aa11.67□□□□□ -0.54
LRTM1-201ENST00000273286 DIS3LQ8TF46 1054 aaKnown RBP11.67□□□□□ -0.54
LRTM1-201ENST00000273286 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.67□□□□□ -0.54
LRTM1-201ENST00000273286 GDF15Q99988 308 aa11.67□□□□□ -0.54
LRTM1-201ENST00000273286 PAGR1Q9BTK6 254 aa11.67□□□□□ -0.54
LRTM1-201ENST00000273286 CRNKL1Q9BZJ0 848 aaKnown RBP11.67□□□□□ -0.54
LRTM1-201ENST00000273286 MYO5AQ9Y4I1 1855 aaKnown RBP11.66□□□□□ -0.54
LRTM1-201ENST00000273286 SLC15A5A6NIM6 579 aa11.66□□□□□ -0.54
LRTM1-201ENST00000273286 PRR19A6NJB7 356 aa11.66□□□□□ -0.54
LRTM1-201ENST00000273286 DRD2P14416 443 aa11.66□□□□□ -0.54
LRTM1-201ENST00000273286 VCAM1P19320 739 aa11.66□□□□□ -0.54
LRTM1-201ENST00000273286 KIAA0319Q5VV43 1072 aa11.66□□□□□ -0.54
LRTM1-201ENST00000273286 MFSD14CQ5VZR4 134 aa11.66□□□□□ -0.54
LRTM1-201ENST00000273286 CATSPERGQ6ZRH7 1159 aa11.66□□□□□ -0.54
LRTM1-201ENST00000273286 RPAP2Q8IXW5 612 aaPredicted RBP11.66□□□□□ -0.54
LRTM1-201ENST00000273286 C7orf61Q8IZ16 206 aa11.66□□□□□ -0.54
LRTM1-201ENST00000273286 EDC3Q96F86 508 aaKnown RBP11.66□□□□□ -0.54
LRTM1-201ENST00000273286 MFSD14AQ96MC6 490 aa11.66□□□□□ -0.54
LRTM1-201ENST00000273286 RIOK1Q9BRS2 568 aaKnown RBP11.66□□□□□ -0.54
LRTM1-201ENST00000273286 PORCNQ9H237 461 aa11.66□□□□□ -0.54
LRTM1-201ENST00000273286 STAP2Q9UGK3 403 aa11.66□□□□□ -0.54
LRTM1-201ENST00000273286 DDX60LQ5H9U9 1706 aaKnown RBP11.65□□□□□ -0.54
LRTM1-201ENST00000273286 HOXC6P09630 235 aa11.65□□□□□ -0.54
LRTM1-201ENST00000273286 RLBP1P12271 317 aa11.65□□□□□ -0.54
LRTM1-201ENST00000273286 CACNB2Q08289 660 aaPredicted RBP11.65□□□□□ -0.54
LRTM1-201ENST00000273286 SLC9C2Q5TAH2 1124 aa11.65□□□□□ -0.54
LRTM1-201ENST00000273286 DIEXFQ68CQ4 756 aaKnown RBP11.65□□□□□ -0.54
LRTM1-201ENST00000273286 KIF1BPQ96EK5 621 aa11.65□□□□□ -0.54
LRTM1-201ENST00000273286 HOXC10Q9NYD6 342 aa11.65□□□□□ -0.54
LRTM1-201ENST00000273286 SWAP70Q9UH65 585 aa11.65□□□□□ -0.54
LRTM1-201ENST00000273286 EXOC6BQ9Y2D4 811 aa11.65□□□□□ -0.54
LRTM1-201ENST00000273286 WDR64B1ANS9 1081 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 GPR182O15218 404 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 STRNO43815 780 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 COL6A1P12109 1028 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 ZYXQ15942 572 aaKnown RBP11.64□□□□□ -0.55
LRTM1-201ENST00000273286 LRIT3Q3SXY7 679 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 MB21D1Q8N884 522 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 LPAR1Q92633 364 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 CITED4Q96RK1 184 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 ANTXR1Q9H6X2 564 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 SH2D4AQ9H788 454 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 MCM9Q9NXL9 1143 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 SLC5A4Q9NY91 659 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 DDX19BQ9UMR2 479 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 ZBED9Q6R2W3 1325 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 ALPK3Q96L96 1907 aa11.64□□□□□ -0.55
LRTM1-201ENST00000273286 PFASO15067 1338 aa11.63□□□□□ -0.55
LRTM1-201ENST00000273286 RAB11FIP3O75154 756 aa11.63□□□□□ -0.55
LRTM1-201ENST00000273286 IFIT2P09913 472 aaKnown RBP11.63□□□□□ -0.55
LRTM1-201ENST00000273286 MAOBP27338 520 aa11.63□□□□□ -0.55
LRTM1-201ENST00000273286 SHMT1P34896 483 aa11.63□□□□□ -0.55
LRTM1-201ENST00000273286 USP11P51784 963 aa11.63□□□□□ -0.55
LRTM1-201ENST00000273286 ATP2B2Q01814 1243 aa11.63□□□□□ -0.55
LRTM1-201ENST00000273286 GABPAQ06546 454 aa11.63□□□□□ -0.55
LRTM1-201ENST00000273286 GRB14Q14449 540 aa11.63□□□□□ -0.55
LRTM1-201ENST00000273286 COG2Q14746 738 aa11.63□□□□□ -0.55
LRTM1-201ENST00000273286 SHROOM1Q2M3G4 852 aaPredicted RBP11.63□□□□□ -0.55
LRTM1-201ENST00000273286 WDR78Q5VTH9 848 aa11.63□□□□□ -0.55
LRTM1-201ENST00000273286 TMEM179Q6ZVK1 233 aa11.63□□□□□ -0.55
LRTM1-201ENST00000273286 AMOTL1Q8IY63 956 aa11.63□□□□□ -0.55
LRTM1-201ENST00000273286 TDHQ8IZJ6 230 aa11.63□□□□□ -0.55
LRTM1-201ENST00000273286 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.63□□□□□ -0.55
LRTM1-201ENST00000273286 RPAP3Q9H6T3 665 aaPredicted RBP11.63□□□□□ -0.55
LRTM1-201ENST00000273286 CNMDO75829 334 aa11.62□□□□□ -0.55
LRTM1-201ENST00000273286 CYP11A1P05108 521 aa11.62□□□□□ -0.55
LRTM1-201ENST00000273286 CTSBP07858 339 aa11.62□□□□□ -0.55
LRTM1-201ENST00000273286 PDE6AP16499 860 aa11.62□□□□□ -0.55
LRTM1-201ENST00000273286 PLCD1P51178 756 aa11.62□□□□□ -0.55
LRTM1-201ENST00000273286 PDE4CQ08493 712 aa11.62□□□□□ -0.55
LRTM1-201ENST00000273286 POU4F3Q15319 338 aa11.62□□□□□ -0.55
LRTM1-201ENST00000273286 C2CD4AQ8NCU7 369 aaPredicted RBP11.62□□□□□ -0.55
LRTM1-201ENST00000273286 SHCBP1Q8NEM2 672 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms