RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 EFCC1Q9HA90 598 aa9.7□□□□□ -0.86
TRIM43-201ENST00000272395 SLC38A10Q9HBR0 1119 aa9.7□□□□□ -0.86
TRIM43-201ENST00000272395 ZHX1Q9UKY1 873 aaPredicted RBP9.7□□□□□ -0.86
TRIM43-201ENST00000272395 RAB21Q9UL25 225 aa9.7□□□□□ -0.86
TRIM43-201ENST00000272395 ZNF214Q9UL59 606 aaPredicted RBP9.7□□□□□ -0.86
TRIM43-201ENST00000272395 CAPN11Q9UMQ6 739 aa9.7□□□□□ -0.86
TRIM43-201ENST00000272395 GDAQ9Y2T3 454 aa9.7□□□□□ -0.86
TRIM43-201ENST00000272395 EPN1Q9Y6I3 576 aaPredicted RBP9.7□□□□□ -0.86
TRIM43-201ENST00000272395 ZNF536O15090 1300 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 ADAMTS3O15072 1205 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 CYTH3O43739 400 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 ZBED4O75132 1171 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 NDUFA10O95299 355 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 ARHGAP25P42331 645 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 KRT83P78385 493 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 LACTBP83111 547 aaPredicted RBP9.69□□□□□ -0.86
TRIM43-201ENST00000272395 CDC37Q16543 378 aaPredicted RBP9.69□□□□□ -0.86
TRIM43-201ENST00000272395 INF2Q27J81 1249 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 FIGNQ5HY92 759 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 SNRNP48Q6IEG0 339 aaKnown RBP9.69□□□□□ -0.86
TRIM43-201ENST00000272395 TYW1BQ6NUM6 668 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 CABP7Q86V35 215 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 GTF3C2Q8WUA4 911 aaPredicted RBP9.69□□□□□ -0.86
TRIM43-201ENST00000272395 RRP36Q96EU6 259 aaKnown RBP9.69□□□□□ -0.86
TRIM43-201ENST00000272395 TRIM47Q96LD4 638 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 MOV10L1Q9BXT6 1211 aaKnown RBP9.69□□□□□ -0.86
TRIM43-201ENST00000272395 IRX2Q9BZI1 471 aaPredicted RBP9.69□□□□□ -0.86
TRIM43-201ENST00000272395 SPATC1LQ9H0A9 340 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 GBP3Q9H0R5 595 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 TMEM60Q9H2L4 133 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 RANBP17Q9H2T7 1088 aaKnown RBP9.69□□□□□ -0.86
TRIM43-201ENST00000272395 JMJD4Q9H9V9 463 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 HOMER2Q9NSB8 354 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 RIPK3Q9Y572 518 aa9.69□□□□□ -0.86
TRIM43-201ENST00000272395 CTDP1Q9Y5B0 961 aaPredicted RBP9.69□□□□□ -0.86
TRIM43-201ENST00000272395 CCNE1P24864 410 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 PSMC4P43686 418 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 NAPAP54920 295 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 CDK17Q00537 523 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 GPS2Q13227 327 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 MEA1Q16626 185 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 WDR78Q5VTH9 848 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 FOXR2Q6PJQ5 311 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 NEK8Q86SG6 692 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 NCAPG2Q86XI2 1143 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 CCDC170Q8IYT3 715 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 SLC35F6Q8N357 371 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 P2RX5Q93086 422 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 FUT8Q9BYC5 575 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 EXOC1Q9NV70 894 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 ZNHIT6Q9NWK9 470 aaKnown RBP9.68□□□□□ -0.86
TRIM43-201ENST00000272395 STK17AQ9UEE5 414 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 SEC63Q9UGP8 760 aaKnown RBP9.68□□□□□ -0.86
TRIM43-201ENST00000272395 RLFQ13129 1914 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 ABCB11O95342 1321 aa9.68□□□□□ -0.86
TRIM43-201ENST00000272395 A0A1W2PQJ5 194 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 TTC26A0AVF1 554 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 CTAGE15A4D2H0 777 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 PPP1R11O60927 126 aaPredicted RBP9.67□□□□□ -0.86
TRIM43-201ENST00000272395 CTAGE8P0CG41 777 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 PLCG1P19174 1290 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 ERCC3P19447 782 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 MCM3P25205 808 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 CYLC1P35663 651 aaPredicted RBP9.67□□□□□ -0.86
TRIM43-201ENST00000272395 STAT3P40763 770 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 ZBED6P86452 979 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 QRICH1Q2TAL8 776 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 USH1GQ495M9 461 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 CNNM4Q6P4Q7 775 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 CTAGE6Q86UF2 777 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 CTAGE4Q8IX94 777 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 CSGALNACT2Q8N6G5 542 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 ACRBPQ8NEB7 543 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 RASGRP4Q8TDF6 673 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 CALML4Q96GE6 196 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 RPGRIP1Q96KN7 1286 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 PIGSQ96S52 555 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 TEX13BQ9BXU2 312 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 TRIM9Q9C026 710 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 LRRC27Q9C0I9 530 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 CCPG1Q9ULG6 757 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 MYO6Q9UM54 1294 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 MYH7BA7E2Y1 1941 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 PVALEFA0A1B0GWK0 134 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 SMCO2A6NFE2 343 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 RNF225M0QZC1 329 aaPredicted RBP9.67□□□□□ -0.86
TRIM43-201ENST00000272395 MAP2K7O14733 419 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 SEC31AO94979 1220 aaKnown RBP9.67□□□□□ -0.86
TRIM43-201ENST00000272395 IPO7O95373 1038 aaKnown RBP9.67□□□□□ -0.86
TRIM43-201ENST00000272395 FGFR1OPO95684 399 aaKnown RBP9.67□□□□□ -0.86
TRIM43-201ENST00000272395 ALAS1P13196 640 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 CDC25AP30304 524 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 CYP2C19P33261 490 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 FCGRTP55899 365 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 AMPD2Q01433 879 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 SMC1AQ14683 1233 aaKnown RBP9.67□□□□□ -0.86
TRIM43-201ENST00000272395 KIF22Q14807 665 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 LONRF2Q1L5Z9 754 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 MUM1L1Q5H9M0 696 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 HDXQ7Z353 690 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms