RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 GIT2Q14161 759 aa11.93□□□□□ -0.5
PRUNE1-201ENST00000271620 TXLNBQ8N3L3 684 aa11.93□□□□□ -0.5
PRUNE1-201ENST00000271620 ETNPPLQ8TBG4 499 aa11.93□□□□□ -0.5
PRUNE1-201ENST00000271620 EXOC4Q96A65 974 aa11.93□□□□□ -0.5
PRUNE1-201ENST00000271620 LENG9Q96B70 501 aa11.93□□□□□ -0.5
PRUNE1-201ENST00000271620 PRMT6Q96LA8 375 aaPredicted RBP11.93□□□□□ -0.5
PRUNE1-201ENST00000271620 CCDC17Q96LX7 622 aa11.93□□□□□ -0.5
PRUNE1-201ENST00000271620 NOX5Q96PH1 765 aa11.93□□□□□ -0.5
PRUNE1-201ENST00000271620 DNM3Q9UQ16 869 aa11.93□□□□□ -0.5
PRUNE1-201ENST00000271620 MYH4Q9Y623 1939 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 TCP10L2B9ZVM9 353 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 OPLAHO14841 1288 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 MSH4O15457 936 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 GCNT3O95395 438 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 DNAJC21Q5F1R6 531 aaKnown RBP11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 CCDC174Q6PII3 467 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 CSRNP1Q96S65 589 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 RUSC1Q9BVN2 902 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 CEP72Q9P209 647 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 CETN3O15182 167 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 AKAP3O75969 853 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 USP11P51784 963 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 PTK2Q05397 1052 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 TRADDQ15628 312 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 ZC2HC1CQ53FD0 456 aaPredicted RBP11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 PODNQ7Z5L7 613 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 TPH2Q8IWU9 490 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 NLGN1Q8N2Q7 840 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 SPAG5Q96R06 1193 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 CALCOCO1Q9P1Z2 691 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 HDAC9Q9UKV0 1011 aa11.92□□□□□ -0.5
PRUNE1-201ENST00000271620 KIAA1755Q5JYT7 1200 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 DACT2Q5SW24 774 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 TTC19Q6DKK2 380 aaPredicted RBP11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 ACER1Q8TDN7 264 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 MASTLQ96GX5 879 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 PKD2L1Q9P0L9 805 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 HYOU1Q9Y4L1 999 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 LCA5LO95447 670 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 SERPING1P05155 500 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 PLS1Q14651 629 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 MAP9Q49MG5 647 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 HYIQ5T013 277 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 HAUS3Q68CZ6 603 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 MAEAQ7L5Y9 396 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 IFT81Q8WYA0 676 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 ARMCX3Q9UH62 379 aaPredicted RBP11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 LCMT1Q9UIC8 334 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 AGPSO00116 658 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 APBA3O96018 575 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 BMP3P12645 472 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 NMT1P30419 496 aaKnown RBP11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 PDE6BP35913 854 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 SYDE2Q5VT97 1194 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 SLFN12Q8IYM2 578 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 FAM71BQ8TC56 605 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 RPGRIP1Q96KN7 1286 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 SH2D3AQ9BRG2 576 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 NYAP2Q9P242 653 aa11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 AJAP1Q9UKB5 411 aaPredicted RBP11.91□□□□□ -0.5
PRUNE1-201ENST00000271620 ZC3H4Q9UPT8 1303 aaKnown RBP11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 PAFAH1B1P43034 410 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 NOP2P46087 812 aaKnown RBP11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 COG2Q14746 738 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 KNOP1Q1ED39 458 aaKnown RBP11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 TMEM179Q6ZVK1 233 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 RDH13Q8NBN7 331 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 MKL1Q969V6 931 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 EHD4Q9H223 541 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 ABCB11O95342 1321 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 TARSL2A2RTX5 802 aaKnown RBP11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 GLI1P08151 1106 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 XRCC5P13010 732 aaKnown RBP11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 UCHL3P15374 230 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 RPA1P27694 616 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 SLC18A3Q16572 532 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 C8orf74Q6P047 294 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 MIGA2Q7L4E1 593 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 ZNF571Q7Z3V5 609 aaPredicted RBP11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 RBM46Q8TBY0 533 aaKnown RBP11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 DCAF4Q8WV16 495 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 CRYGNQ8WXF5 182 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 CEP63Q96MT8 703 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 EIF2AK1Q9BQI3 630 aaKnown RBP11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 PRR12Q9ULL5 1215 aa11.9□□□□□ -0.5
PRUNE1-201ENST00000271620 SSU72P8A0A1W2PR75 194 aa11.89□□□□□ -0.51
PRUNE1-201ENST00000271620 GOLGA6BA6NDN3 693 aa11.89□□□□□ -0.51
PRUNE1-201ENST00000271620 TMCO5BA8MYB1 307 aa11.89□□□□□ -0.51
PRUNE1-201ENST00000271620 DDX39AO00148 427 aaKnown RBP11.89□□□□□ -0.51
PRUNE1-201ENST00000271620 TUBBP07437 444 aa11.89□□□□□ -0.51
PRUNE1-201ENST00000271620 TCP1P17987 556 aaKnown RBP11.89□□□□□ -0.51
PRUNE1-201ENST00000271620 ACTN2P35609 894 aa11.89□□□□□ -0.51
PRUNE1-201ENST00000271620 ASIC2Q16515 512 aa11.89□□□□□ -0.51
PRUNE1-201ENST00000271620 TBC1D10BQ4KMP7 808 aaPredicted RBP11.89□□□□□ -0.51
PRUNE1-201ENST00000271620 RBM26Q5T8P6 1007 aaKnown RBP11.89□□□□□ -0.51
PRUNE1-201ENST00000271620 STRIP1Q5VSL9 837 aa11.89□□□□□ -0.51
PRUNE1-201ENST00000271620 IQCEQ6IPM2 695 aa11.89□□□□□ -0.51
PRUNE1-201ENST00000271620 CCDC70Q6NSX1 233 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms