RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 IGSF22Q8N9C0 903 aa13.97□□□□□ -0.17
PRPF6-201ENST00000266079 PKD2L1Q9P0L9 805 aa13.97□□□□□ -0.17
PRPF6-201ENST00000266079 RBPJLQ9UBG7 517 aa13.97□□□□□ -0.17
PRPF6-201ENST00000266079 IGF2BP3O00425 579 aaKnown RBP eCLIP13.97□□□□□ -0.17
PRPF6-201ENST00000266079 SHOX2O60902 331 aaPredicted RBP13.97□□□□□ -0.17
PRPF6-201ENST00000266079 ARHGAP4P98171 946 aa13.97□□□□□ -0.17
PRPF6-201ENST00000266079 RNF207Q6ZRF8 634 aa13.97□□□□□ -0.17
PRPF6-201ENST00000266079 CPLX3Q8WVH0 158 aa13.97□□□□□ -0.17
PRPF6-201ENST00000266079 KAT2BQ92831 832 aa13.97□□□□□ -0.17
PRPF6-201ENST00000266079 SPATC1LQ9H0A9 340 aa13.97□□□□□ -0.17
PRPF6-201ENST00000266079 MYO1AQ9UBC5 1043 aa13.97□□□□□ -0.17
PRPF6-201ENST00000266079 HPCAL4Q9UM19 191 aa13.97□□□□□ -0.17
PRPF6-201ENST00000266079 MARCH6O60337 910 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 ZNF76P36508 570 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 SARSP49591 514 aaKnown RBP13.96□□□□□ -0.17
PRPF6-201ENST00000266079 PRR16Q569H4 304 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 ANKRD35Q8N283 1001 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 IL31RAQ8NI17 732 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 TAAR1Q96RJ0 339 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 MOV10L1Q9BXT6 1211 aaKnown RBP13.96□□□□□ -0.17
PRPF6-201ENST00000266079 CXorf56Q9H5V9 222 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 MYO6Q9UM54 1294 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 ADAMTS5Q9UNA0 930 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 COL11A1P12107 1806 aaPredicted RBP13.96□□□□□ -0.17
PRPF6-201ENST00000266079 MFAP3LO75121 409 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 MYCLP12524 364 aaPredicted RBP13.96□□□□□ -0.17
PRPF6-201ENST00000266079 ERCC3P19447 782 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 TXKP42681 527 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 AMPD2Q01433 879 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 APTXQ7Z2E3 356 aaKnown RBP13.96□□□□□ -0.17
PRPF6-201ENST00000266079 TRIML1Q8N9V2 468 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 PORCNQ9H237 461 aa13.96□□□□□ -0.17
PRPF6-201ENST00000266079 PP2D1A8MPX8 630 aa13.96□□□□□ -0.18
PRPF6-201ENST00000266079 ZBTB48P10074 688 aaPredicted RBP13.96□□□□□ -0.18
PRPF6-201ENST00000266079 PBX1P40424 430 aa13.96□□□□□ -0.18
PRPF6-201ENST00000266079 LIG3P49916 1009 aa13.96□□□□□ -0.18
PRPF6-201ENST00000266079 PABPC4Q13310 644 aaKnown RBP eCLIP13.96□□□□□ -0.185e-7■■■■□ 24.7
PRPF6-201ENST00000266079 MAP9Q49MG5 647 aa13.96□□□□□ -0.18
PRPF6-201ENST00000266079 CSRNP2Q9H175 543 aa13.96□□□□□ -0.18
PRPF6-201ENST00000266079 A1CFQ9NQ94 594 aaKnown RBP13.96□□□□□ -0.18
PRPF6-201ENST00000266079 CPA4Q9UI42 421 aa13.96□□□□□ -0.18
PRPF6-201ENST00000266079 TLL2Q9Y6L7 1015 aa13.96□□□□□ -0.18
PRPF6-201ENST00000266079 RLFQ13129 1914 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 AOC2O75106 756 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 PGK2P07205 417 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 FECHP22830 423 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 MCM3P25205 808 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 ERCC5P28715 1186 aaPredicted RBP13.95□□□□□ -0.18
PRPF6-201ENST00000266079 CNTN2Q02246 1040 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 SKIDA1Q1XH10 827 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 ACRBPQ8NEB7 543 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 SYTL5Q8TDW5 730 aaPredicted RBP13.95□□□□□ -0.18
PRPF6-201ENST00000266079 CCDC51Q96ER9 411 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 EBAG9O00559 213 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 CNMDO75829 334 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 ABL1P00519 1130 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 TRAF1Q13077 416 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 NCAPH2Q6IBW4 605 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 KRI1Q8N9T8 703 aaKnown RBP13.95□□□□□ -0.18
PRPF6-201ENST00000266079 EPSTI1Q96J88 318 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 PLIN2Q99541 437 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 ACAD9Q9H845 621 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 DDX25Q9UHL0 483 aaKnown RBP13.95□□□□□ -0.18
PRPF6-201ENST00000266079 CEP131Q9UPN4 1083 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 FAM169AQ9Y6X4 670 aa13.95□□□□□ -0.18
PRPF6-201ENST00000266079 FAM86B1E9PN63 330 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 FAM86B2P0C5J1 330 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 HNRNPH1P31943 449 aaKnown RBP13.94□□□□□ -0.18
PRPF6-201ENST00000266079 CCT5P48643 541 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 STIM1Q13586 685 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 IL17AQ16552 155 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 CNGA4Q8IV77 575 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 COG1Q8WTW3 980 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 RMDN3Q96TC7 470 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 FBXO2Q9UK22 296 aaPredicted RBP13.94□□□□□ -0.18
PRPF6-201ENST00000266079 HTTP42858 3142 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 SORBS3O60504 671 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 CASP14P31944 242 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 USP8P40818 1118 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 ARHGAP25P42331 645 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 TECP42680 631 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 TRAPPC10P48553 1259 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 MCF2L2Q86YR7 1114 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 ANKRD20A12PQ8NF67 263 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 RIN2Q8WYP3 895 aaPredicted RBP13.94□□□□□ -0.18
PRPF6-201ENST00000266079 GLT8D2Q9H1C3 349 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 SERTAD1Q9UHV2 236 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 TRPM7Q96QT4 1865 aa13.94□□□□□ -0.18
PRPF6-201ENST00000266079 CCDC172P0C7W6 258 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 MAP2K2P36507 400 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 MNAT1P51948 309 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 AP3B2Q13367 1082 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 TAF1CQ15572 869 aaPredicted RBP13.93□□□□□ -0.18
PRPF6-201ENST00000266079 TMTC1Q8IUR5 882 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 ADD3Q9UEY8 706 aaKnown RBP13.93□□□□□ -0.18
PRPF6-201ENST00000266079 PNMA3Q9UL41 463 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 MYH7BA7E2Y1 1941 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 FDX1P10109 184 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 IRAK1P51617 712 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms