RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 LCTP09848 1927 aa17.53■□□□□ 0.4
VPS26A-201ENST00000263559 IQCA1LA6NCM1 817 aa17.53■□□□□ 0.4
VPS26A-201ENST00000263559 AKR1B15C9JRZ8 316 aaPredicted RBP17.53■□□□□ 0.4
VPS26A-201ENST00000263559 PES1O00541 588 aaKnown RBP17.53■□□□□ 0.4
VPS26A-201ENST00000263559 GRIN3BO60391 1043 aa17.53■□□□□ 0.4
VPS26A-201ENST00000263559 ZCWPW2Q504Y3 356 aa17.53■□□□□ 0.4
VPS26A-201ENST00000263559 E4F1Q66K89 784 aaPredicted RBP17.53■□□□□ 0.4
VPS26A-201ENST00000263559 NELFCDQ8IXH7 590 aa17.53■□□□□ 0.4
VPS26A-201ENST00000263559 MB21D1Q8N884 522 aa17.53■□□□□ 0.4
VPS26A-201ENST00000263559 TSG101Q99816 390 aa17.53■□□□□ 0.4
VPS26A-201ENST00000263559 A0A0G2JMZ2 1700 aa17.52■□□□□ 0.4
VPS26A-201ENST00000263559 MTIF2P46199 727 aaKnown RBP17.52■□□□□ 0.4
VPS26A-201ENST00000263559 CASP5P51878 434 aa17.52■□□□□ 0.4
VPS26A-201ENST00000263559 FOXR2Q6PJQ5 311 aa17.52■□□□□ 0.4
VPS26A-201ENST00000263559 CCAR2Q8N163 923 aaKnown RBP17.52■□□□□ 0.4
VPS26A-201ENST00000263559 NEK9Q8TD19 979 aa17.52■□□□□ 0.4
VPS26A-201ENST00000263559 TRMT1Q9NXH9 659 aaKnown RBP17.52■□□□□ 0.4
VPS26A-201ENST00000263559 SAMM50Q9Y512 469 aa17.52■□□□□ 0.4
VPS26A-201ENST00000263559 LOXHD1Q8IVV2 1947 aa17.52■□□□□ 0.39
VPS26A-201ENST00000263559 B4DLN1 442 aa17.52■□□□□ 0.39
VPS26A-201ENST00000263559 GYPCP04921 128 aa17.52■□□□□ 0.39
VPS26A-201ENST00000263559 P4HBP07237 508 aaKnown RBP17.52■□□□□ 0.39
VPS26A-201ENST00000263559 CASP14P31944 242 aa17.52■□□□□ 0.39
VPS26A-201ENST00000263559 LRRC55Q6ZSA7 311 aa17.52■□□□□ 0.39
VPS26A-201ENST00000263559 CHST13Q8NET6 341 aa17.52■□□□□ 0.39
VPS26A-201ENST00000263559 BAG1Q99933 345 aaPredicted RBP17.52■□□□□ 0.39
VPS26A-201ENST00000263559 KCND1Q9NSA2 647 aa17.52■□□□□ 0.39
VPS26A-201ENST00000263559 KCNH4Q9UQ05 1017 aa17.52■□□□□ 0.39
VPS26A-201ENST00000263559 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.52■□□□□ 0.392e-6■■□□□ 12
VPS26A-201ENST00000263559 SFI1A8K8P3 1242 aa17.51■□□□□ 0.39
VPS26A-201ENST00000263559 KCNJ6P48051 423 aa17.51■□□□□ 0.39
VPS26A-201ENST00000263559 PPIL2Q13356 520 aa17.51■□□□□ 0.39
VPS26A-201ENST00000263559 OPTNQ96CV9 577 aa17.51■□□□□ 0.39
VPS26A-201ENST00000263559 KCTD10Q9H3F6 313 aa17.51■□□□□ 0.39
VPS26A-201ENST00000263559 TBCAO75347 108 aaKnown RBP17.51■□□□□ 0.39
VPS26A-201ENST00000263559 RGS20O76081 388 aa17.51■□□□□ 0.39
VPS26A-201ENST00000263559 KIF20AO95235 890 aa17.51■□□□□ 0.39
VPS26A-201ENST00000263559 FGFR1OPO95684 399 aaKnown RBP17.51■□□□□ 0.39
VPS26A-201ENST00000263559 IRX3P78415 501 aaPredicted RBP17.51■□□□□ 0.39
VPS26A-201ENST00000263559 MIIPQ5JXC2 388 aa17.51■□□□□ 0.39
VPS26A-201ENST00000263559 ARMC9Q7Z3E5 817 aa17.51■□□□□ 0.39
VPS26A-201ENST00000263559 GPRASP2Q96D09 838 aa17.51■□□□□ 0.39
VPS26A-201ENST00000263559 C16orf45Q96MC5 204 aaPredicted RBP17.51■□□□□ 0.39
VPS26A-201ENST00000263559 INPP4AQ96PE3 977 aaPredicted RBP17.51■□□□□ 0.39
VPS26A-201ENST00000263559 NOC4LQ9BVI4 516 aaKnown RBP17.51■□□□□ 0.39
VPS26A-201ENST00000263559 MAF1Q9H063 256 aa17.51■□□□□ 0.39
VPS26A-201ENST00000263559 ASCC2Q9H1I8 757 aaPredicted RBP17.51■□□□□ 0.39
VPS26A-201ENST00000263559 R3HCC1Q9Y3T6 440 aaKnown RBP17.51■□□□□ 0.39
VPS26A-201ENST00000263559 COL4A3BPQ9Y5P4 624 aa17.51■□□□□ 0.39
VPS26A-201ENST00000263559 POTEJP0CG39 1038 aa17.5■□□□□ 0.39
VPS26A-201ENST00000263559 DNM2P50570 870 aa17.5■□□□□ 0.39
VPS26A-201ENST00000263559 FXR1P51114 621 aaKnown RBP eCLIP17.5■□□□□ 0.39
VPS26A-201ENST00000263559 NLRX1Q86UT6 975 aa17.5■□□□□ 0.39
VPS26A-201ENST00000263559 PNMA8AQ86V59 439 aaPredicted RBP17.5■□□□□ 0.39
VPS26A-201ENST00000263559 ZSWIM4Q9H7M6 989 aa17.5■□□□□ 0.39
VPS26A-201ENST00000263559 TRAF5O00463 557 aa17.5■□□□□ 0.39
VPS26A-201ENST00000263559 CCNE2O96020 404 aa17.5■□□□□ 0.39
VPS26A-201ENST00000263559 FKBP3Q00688 224 aaKnown RBP17.5■□□□□ 0.39
VPS26A-201ENST00000263559 EPM2AIP1Q7L775 607 aaPredicted RBP17.5■□□□□ 0.39
VPS26A-201ENST00000263559 RIOX2Q8IUF8 465 aa17.5■□□□□ 0.39
VPS26A-201ENST00000263559 ANKRD35Q8N283 1001 aa17.5■□□□□ 0.39
VPS26A-201ENST00000263559 PANX2Q96RD6 677 aa17.5■□□□□ 0.39
VPS26A-201ENST00000263559 CLEC11AQ9Y240 323 aa17.5■□□□□ 0.39
VPS26A-201ENST00000263559 MYH11P35749 1972 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 A0A1W2PQC6 194 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 RNF225M0QZC1 329 aaPredicted RBP17.49■□□□□ 0.39
VPS26A-201ENST00000263559 MAFGO15525 162 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 STX10O60499 249 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 MFAP3LO75121 409 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 TPM2P07951 284 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 MYBP10242 640 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 QARSP47897 775 aaKnown RBP17.49■□□□□ 0.39
VPS26A-201ENST00000263559 SPATC1LQ9H0A9 340 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 MRPL44Q9H9J2 332 aaKnown RBP17.49■□□□□ 0.39
VPS26A-201ENST00000263559 AGTPBP1Q9UPW5 1226 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 DOCK5Q9H7D0 1870 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 ARHGAP6O43182 974 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 FAM13AO94988 1023 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 HERVK_113P62684 666 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 CNTN2Q02246 1040 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 TBC1D8BQ0IIM8 1120 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 MOGSQ13724 837 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 PAGR1Q9BTK6 254 aa17.49■□□□□ 0.39
VPS26A-201ENST00000263559 WDR81Q562E7 1941 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 ARHGEF35A5YM69 484 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 PRPF6O94906 941 aaKnown RBP17.48■□□□□ 0.39
VPS26A-201ENST00000263559 GAP43P17677 238 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 HOXD13P35453 343 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 LDLRAD1Q5T700 205 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 CNGA4Q8IV77 575 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 OLFML3Q9NRN5 406 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 KCND2Q9NZV8 630 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 TPM1P09493 284 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 JAK3P52333 1124 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 KRT76Q01546 638 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 MAP1SQ66K74 1059 aaPredicted RBP17.48■□□□□ 0.39
VPS26A-201ENST00000263559 NCAPG2Q86XI2 1143 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 MYCT1Q8N699 235 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 FBXO40Q9UH90 709 aa17.48■□□□□ 0.39
VPS26A-201ENST00000263559 ASTN1O14525 1302 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms