RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CDY2AQ9Y6F7 541 aa13.97□□□□□ -0.17
TRAF4-202ENST00000262396 PRRC2BQ5JSZ5 2229 aaKnown RBP13.96□□□□□ -0.17
TRAF4-202ENST00000262396 CHD9Q3L8U1 2897 aa13.96□□□□□ -0.17
TRAF4-202ENST00000262396 TTC28Q96AY4 2481 aa13.96□□□□□ -0.17
TRAF4-202ENST00000262396 CSPG5O95196 566 aa13.96□□□□□ -0.17
TRAF4-202ENST00000262396 INSRRP14616 1297 aa13.96□□□□□ -0.17
TRAF4-202ENST00000262396 METAP2P50579 478 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRAF4-202ENST00000262396 STAT5BP51692 787 aa13.96□□□□□ -0.17
TRAF4-202ENST00000262396 MRPS6P82932 125 aaKnown RBP13.96□□□□□ -0.17
TRAF4-202ENST00000262396 HTRA4P83105 476 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-202ENST00000262396 AP3B2Q13367 1082 aa13.96□□□□□ -0.17
TRAF4-202ENST00000262396 BTG3Q14201 252 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-202ENST00000262396 FAM160B1Q5W0V3 765 aa13.96□□□□□ -0.17
TRAF4-202ENST00000262396 CCDC12Q8WUD4 166 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-202ENST00000262396 LRFN2Q9ULH4 789 aa13.96□□□□□ -0.17
TRAF4-202ENST00000262396 FAM50BQ9Y247 325 aa13.96□□□□□ -0.17
TRAF4-202ENST00000262396 GINS2Q9Y248 185 aa13.96□□□□□ -0.17
TRAF4-202ENST00000262396 CNTNAP5Q8WYK1 1306 aa13.95□□□□□ -0.18
TRAF4-202ENST00000262396 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-202ENST00000262396 CHRNA1P02708 482 aa13.95□□□□□ -0.18
TRAF4-202ENST00000262396 STAG3L1P0CL83 205 aa13.95□□□□□ -0.18
TRAF4-202ENST00000262396 ACTR2P61160 394 aa13.95□□□□□ -0.18
TRAF4-202ENST00000262396 TMEM62Q0P6H9 643 aa13.95□□□□□ -0.18
TRAF4-202ENST00000262396 CEP55Q53EZ4 464 aa13.95□□□□□ -0.18
TRAF4-202ENST00000262396 JAKMIP3Q5VZ66 844 aa13.95□□□□□ -0.18
TRAF4-202ENST00000262396 TSHZ1Q6ZSZ6 1077 aa13.95□□□□□ -0.18
TRAF4-202ENST00000262396 TEX2Q8IWB9 1127 aa13.95□□□□□ -0.18
TRAF4-202ENST00000262396 BANK1Q8NDB2 785 aa13.95□□□□□ -0.18
TRAF4-202ENST00000262396 C6orf50Q9HD87 102 aa13.95□□□□□ -0.18
TRAF4-202ENST00000262396 TRPV2Q9Y5S1 764 aa13.95□□□□□ -0.18
TRAF4-202ENST00000262396 POTEB3A0JP26 581 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 H3BNC9 293 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 ARP10275 920 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 CD52P31358 61 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 ADAM17P78536 824 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 PAK2Q13177 524 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 LPIN1Q14693 890 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 SPOUT1Q5T280 376 aaKnown RBP13.94□□□□□ -0.18
TRAF4-202ENST00000262396 MCTP2Q6DN12 878 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 MIS18BP1Q6P0N0 1132 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 BLOC1S2Q6QNY1 142 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 POTEBQ6S5H4 581 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 RPAINQ86UA6 219 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 PLA2G4DQ86XP0 818 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 SP7Q8TDD2 431 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-202ENST00000262396 PPP2R3CQ969Q6 453 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 JAKMIP1Q96N16 626 aaKnown RBP13.94□□□□□ -0.18
TRAF4-202ENST00000262396 C11orf84Q9BUA3 381 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-202ENST00000262396 FTHL17Q9BXU8 183 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 NSUN3Q9H649 340 aaKnown RBP13.94□□□□□ -0.18
TRAF4-202ENST00000262396 TMEM260Q9NX78 707 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 BARHL2Q9NY43 387 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 BRPF3Q9ULD4 1205 aa13.94□□□□□ -0.18
TRAF4-202ENST00000262396 NFASCO94856 1347 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 ADGRA3Q8IWK6 1321 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 RBAK-RBAKDNI3L0D1 243 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 STXBP3O00186 592 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 ENPP3O14638 875 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 RB1P06400 928 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 SLC26A2P50443 739 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 KRT76Q01546 638 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 EXOSC10Q01780 885 aaKnown RBP13.93□□□□□ -0.18
TRAF4-202ENST00000262396 NFX1Q12986 1120 aaKnown RBP13.93□□□□□ -0.18
TRAF4-202ENST00000262396 PLCB4Q15147 1175 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 PUS10Q3MIT2 529 aaKnown RBP13.93□□□□□ -0.18
TRAF4-202ENST00000262396 FBXO47Q5MNV8 452 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 ODR4Q5SWX8 454 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 PTCRAQ6ISU1 281 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-202ENST00000262396 PDXDC2PQ6P474 469 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 PLPPR4Q7Z2D5 763 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 TRMT1LQ7Z2T5 733 aaKnown RBP13.93□□□□□ -0.18
TRAF4-202ENST00000262396 SKAP1Q86WV1 359 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 CYP2W1Q8TAV3 490 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 OSBPL7Q9BZF2 842 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 AGO4Q9HCK5 861 aaKnown RBP13.93□□□□□ -0.18
TRAF4-202ENST00000262396 ZNF302Q9NR11 478 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-202ENST00000262396 CLDND1Q9NY35 253 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 SAMM50Q9Y512 469 aa13.93□□□□□ -0.18
TRAF4-202ENST00000262396 TCF20Q9UGU0 1960 aaKnown RBP13.92□□□□□ -0.18
TRAF4-202ENST00000262396 H3BQ06 376 aaPredicted RBP13.92□□□□□ -0.18
TRAF4-202ENST00000262396 NCK2O43639 380 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 SCG2P13521 617 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 PSMA5P28066 241 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 GNA11P29992 359 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 BMPR1AP36894 532 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 SREBF1P36956 1147 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 MGAT3Q09327 533 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 APOBRQ0VD83 1088 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 COL9A3Q14050 684 aaPredicted RBP13.92□□□□□ -0.18
TRAF4-202ENST00000262396 ADCK5Q3MIX3 580 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 LEXMQ3ZCV2 418 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 TCEAL5Q5H9L2 206 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 Q6ZUG5 572 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 NME8Q8N427 588 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 BICD2Q8TD16 824 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 TRAPPC12Q8WVT3 735 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 BRF1Q92994 677 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 ZBTB10Q96DT7 871 aa13.92□□□□□ -0.18
TRAF4-202ENST00000262396 CCDC136Q96JN2 1154 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms