RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 B4DLN1 442 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 ZBTB43O43298 467 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 RB1P06400 928 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 SLC16A2P36021 539 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 THPOP40225 353 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 METAP2P50579 478 aaKnown RBP eCLIP15.21■□□□□ 0.03
SGCA-201ENST00000262018 MRPL12P52815 198 aaKnown RBP15.21■□□□□ 0.03
SGCA-201ENST00000262018 RPS6P62753 249 aaKnown RBP15.21■□□□□ 0.03
SGCA-201ENST00000262018 MFSD10Q14728 455 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 DGKDQ16760 1214 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 LY6KQ17RY6 165 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 KIAA0753Q2KHM9 967 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 MCTP1Q6DN14 999 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 NFXL1Q6ZNB6 911 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 NLRC5Q86WI3 1866 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 FAM184AQ8NB25 1140 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 CLEC4DQ8WXI8 215 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 SEPT8Q92599 483 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 ASIC4Q96FT7 647 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 UBAC1Q9BSL1 405 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 ATP6V1DQ9Y5K8 247 aa15.21■□□□□ 0.03
SGCA-201ENST00000262018 VPS37CA5D8V6 355 aaPredicted RBP15.2■□□□□ 0.02
SGCA-201ENST00000262018 TRAK2O60296 914 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 NMT2O60551 498 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 EYA4O95677 639 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 BMPR1AP36894 532 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 NOVP48745 357 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 CBX2Q14781 532 aaPredicted RBP15.2■□□□□ 0.02
SGCA-201ENST00000262018 TTBK2Q6IQ55 1244 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 SYNE3Q6ZMZ3 975 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 SEPT14Q6ZU15 432 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 DHX37Q8IY37 1157 aaKnown RBP15.2■□□□□ 0.02
SGCA-201ENST00000262018 DNERQ8NFT8 737 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 MSLNLQ96KJ4 702 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 RPGRIP1Q96KN7 1286 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 ZSCAN10Q96SZ4 725 aaPredicted RBP15.2■□□□□ 0.02
SGCA-201ENST00000262018 ZKSCAN3Q9BRR0 538 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 KATNAL1Q9BW62 490 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 SLC12A7Q9Y666 1083 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 TCHHQ07283 1943 aa15.2■□□□□ 0.02
SGCA-201ENST00000262018 ATG2AQ2TAZ0 1938 aa15.19■□□□□ 0.02
SGCA-201ENST00000262018 C5orf67F2Z3F1 127 aa15.19■□□□□ 0.02
SGCA-201ENST00000262018 GALR2O43603 387 aaPredicted RBP15.19■□□□□ 0.02
SGCA-201ENST00000262018 ZNF286BP0CG31 522 aa15.19■□□□□ 0.02
SGCA-201ENST00000262018 FDPSP14324 419 aaKnown RBP15.19■□□□□ 0.02
SGCA-201ENST00000262018 SKOR2Q2VWA4 1001 aaPredicted RBP15.19■□□□□ 0.02
SGCA-201ENST00000262018 SYDE2Q5VT97 1194 aa15.19■□□□□ 0.02
SGCA-201ENST00000262018 DGKHQ86XP1 1220 aa15.19■□□□□ 0.02
SGCA-201ENST00000262018 RGS22Q8NE09 1264 aa15.19■□□□□ 0.02
SGCA-201ENST00000262018 LMBRD1Q9NUN5 540 aa15.19■□□□□ 0.02
SGCA-201ENST00000262018 RALGAPA2Q2PPJ7 1873 aa15.19■□□□□ 0.02
SGCA-201ENST00000262018 CACNA1BQ00975 2339 aa15.19■□□□□ 0.02
SGCA-201ENST00000262018 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.18■□□□□ 0.02
SGCA-201ENST00000262018 GOLGA8AA7E2F4 631 aa15.18■□□□□ 0.02
SGCA-201ENST00000262018 CPLX1O14810 134 aa15.18■□□□□ 0.02
SGCA-201ENST00000262018 CDKL5O76039 1030 aa15.18■□□□□ 0.02
SGCA-201ENST00000262018 PDGFBP01127 241 aaPredicted RBP15.18■□□□□ 0.02
SGCA-201ENST00000262018 TOP1P11387 765 aaKnown RBP15.18■□□□□ 0.02
SGCA-201ENST00000262018 CDC27P30260 824 aa15.18■□□□□ 0.02
SGCA-201ENST00000262018 NBL1P41271 181 aa15.18■□□□□ 0.02
SGCA-201ENST00000262018 NUBP1P53384 320 aa15.18■□□□□ 0.02
SGCA-201ENST00000262018 HIC1Q14526 733 aa15.18■□□□□ 0.02
SGCA-201ENST00000262018 RAB11FIP4Q86YS3 637 aa15.18■□□□□ 0.02
SGCA-201ENST00000262018 ENAHQ8N8S7 591 aaPredicted RBP15.18■□□□□ 0.02
SGCA-201ENST00000262018 FAM217BQ9NTX9 383 aaPredicted RBP15.18■□□□□ 0.02
SGCA-201ENST00000262018 HAS3O00219 553 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 RGS20O76081 388 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 F2P00734 622 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 NTRK3Q16288 839 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 CPLX2Q6PUV4 134 aaKnown RBP15.17■□□□□ 0.02
SGCA-201ENST00000262018 MICU3Q86XE3 530 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 ZNF654Q8IZM8 581 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 SMRP1Q8NCR6 262 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 PPP2R3CQ969Q6 453 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 CHAMP1Q96JM3 812 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 PHF7Q9BWX1 381 aaPredicted RBP15.17■□□□□ 0.02
SGCA-201ENST00000262018 CLEC1BQ9P126 229 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 RWDD3Q9Y3V2 267 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 USP15Q9Y4E8 981 aaPredicted RBP15.17■□□□□ 0.02
SGCA-201ENST00000262018 MMP1P03956 469 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 RXRAP19793 462 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 ADD1P35611 737 aaKnown RBP15.17■□□□□ 0.02
SGCA-201ENST00000262018 GSE1Q14687 1217 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 IFIT1BQ5T764 474 aaKnown RBP15.17■□□□□ 0.02
SGCA-201ENST00000262018 BTNL9Q6UXG8 535 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 SERINC5Q86VE9 423 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 ADSSL1Q8N142 457 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 TMEM87AQ8NBN3 555 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 DCAF4Q8WV16 495 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 TMEM47Q9BQJ4 181 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 MYL10Q9BUA6 226 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 OSBPL7Q9BZF2 842 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 GPCPD1Q9NPB8 672 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 ORC3Q9UBD5 711 aaPredicted RBP15.17■□□□□ 0.02
SGCA-201ENST00000262018 MYH15Q9Y2K3 1946 aa15.17■□□□□ 0.02
SGCA-201ENST00000262018 H3BQV1 296 aa15.16■□□□□ 0.02
SGCA-201ENST00000262018 KRT37O76014 449 aa15.16■□□□□ 0.02
SGCA-201ENST00000262018 CTSHP09668 335 aa15.16■□□□□ 0.02
SGCA-201ENST00000262018 LINC00271P0C7V0 271 aa15.16■□□□□ 0.02
SGCA-201ENST00000262018 ICAM3P32942 547 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms